BLASTX nr result

ID: Glycyrrhiza24_contig00030899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030899
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620151.1| hypothetical protein MTR_6g077830 [Medicago ...   197   6e-49
ref|XP_003549173.1| PREDICTED: plastid division protein CDP1, ch...   195   4e-48
ref|XP_003533291.1| PREDICTED: plastid division protein CDP1, ch...   188   3e-46
ref|XP_002269313.1| PREDICTED: plastid division protein CDP1, ch...   180   9e-44
ref|XP_002329683.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_003620151.1| hypothetical protein MTR_6g077830 [Medicago truncatula]
           gi|355495166|gb|AES76369.1| hypothetical protein
           MTR_6g077830 [Medicago truncatula]
          Length = 821

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = -3

Query: 332 RIVEKNTQMMKSTVEIPVSCYQLIGVPDRAEKDEVVKAVMSLKNTEIEEGYTMDVVASRQ 153
           RIVE   Q++KSTVEIPVSCYQLIGVPDRAEKDE+VKAVMSLKN EI+EGYTM VVASR+
Sbjct: 67  RIVEN--QVLKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTMGVVASRE 124

Query: 152 DLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGES 3
           DLLMDVRDKLLFEPEYAGNLKEKIPPK SLRIPWSWLPGALCLLQE+GES
Sbjct: 125 DLLMDVRDKLLFEPEYAGNLKEKIPPKPSLRIPWSWLPGALCLLQEIGES 174


>ref|XP_003549173.1| PREDICTED: plastid division protein CDP1, chloroplastic-like
           [Glycine max]
          Length = 812

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/112 (87%), Positives = 105/112 (93%), Gaps = 1/112 (0%)
 Frame = -3

Query: 335 TRIVEKNTQMMKST-VEIPVSCYQLIGVPDRAEKDEVVKAVMSLKNTEIEEGYTMDVVAS 159
           TRIVE NTQM  S  +EIPVSCYQLIGVPDRAEKDE+VKAVM LKN EI+EGYT+DVVA+
Sbjct: 63  TRIVE-NTQMKSSAEIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIDEGYTIDVVAA 121

Query: 158 RQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGES 3
           RQDLLMDVRDKLLFEPEYAGNL+EKIPPKSSL+IPWSWLPGALCLLQEVGES
Sbjct: 122 RQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLQIPWSWLPGALCLLQEVGES 173


>ref|XP_003533291.1| PREDICTED: plastid division protein CDP1, chloroplastic-like
           [Glycine max]
          Length = 812

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/112 (84%), Positives = 102/112 (91%), Gaps = 1/112 (0%)
 Frame = -3

Query: 335 TRIVEKNTQMMKST-VEIPVSCYQLIGVPDRAEKDEVVKAVMSLKNTEIEEGYTMDVVAS 159
           TRI E NTQM  S  +EIPVSCYQLIGVPDRAEKDE+VKAVM LKN EI+EGYT+DVV +
Sbjct: 63  TRIAE-NTQMKSSVEIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIDEGYTIDVVTA 121

Query: 158 RQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGES 3
           RQDLLMDVRDKLLFEPEYAGNL+EKIPPKSSL+I WSWLPGALCLLQEVGES
Sbjct: 122 RQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLQIRWSWLPGALCLLQEVGES 173


>ref|XP_002269313.1| PREDICTED: plastid division protein CDP1, chloroplastic [Vitis
           vinifera] gi|296087989|emb|CBI35272.3| unnamed protein
           product [Vitis vinifera]
          Length = 822

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/98 (84%), Positives = 94/98 (95%)
 Frame = -3

Query: 299 STVEIPVSCYQLIGVPDRAEKDEVVKAVMSLKNTEIEEGYTMDVVASRQDLLMDVRDKLL 120
           +TVEIPVSCYQ++GVPD+AEKDE+VK+VM LKN E+EEGYTM+ V SRQDLLMDVRDKLL
Sbjct: 89  TTVEIPVSCYQIVGVPDQAEKDEIVKSVMVLKNAEVEEGYTMETVMSRQDLLMDVRDKLL 148

Query: 119 FEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGE 6
           FEPEYAGN+KEKIPPKS+LRIPW+WLPGALCLLQEVGE
Sbjct: 149 FEPEYAGNVKEKIPPKSALRIPWAWLPGALCLLQEVGE 186


>ref|XP_002329683.1| predicted protein [Populus trichocarpa] gi|222870591|gb|EEF07722.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/98 (82%), Positives = 93/98 (94%)
 Frame = -3

Query: 299 STVEIPVSCYQLIGVPDRAEKDEVVKAVMSLKNTEIEEGYTMDVVASRQDLLMDVRDKLL 120
           +TVEIPV+CYQL+GVPD+AEKDE+V++VM LKN E+EEGYTMD V SRQDLLMDVRDKLL
Sbjct: 5   ATVEIPVTCYQLVGVPDKAEKDEIVRSVMQLKNAEVEEGYTMDAVMSRQDLLMDVRDKLL 64

Query: 119 FEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEVGE 6
           FEPEYAGN+++KIPPKSSLRIP +WLPGALCLLQEVGE
Sbjct: 65  FEPEYAGNVRDKIPPKSSLRIPLAWLPGALCLLQEVGE 102


Top