BLASTX nr result

ID: Glycyrrhiza24_contig00030887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030887
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Gl...   128   4e-28
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    55   6e-06
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    55   8e-06

>ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Glycine max]
          Length = 706

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = +3

Query: 3   LLRSNDDSSGVCSDVCLYLPVNLTDLLEENIMESKYSQIQKFAISEESANISFNTGTVVA 182
           L RSN + SGVCSDVCLYLP++L D+LE+NIMESK SQ   FAIS++SAN+S  T  VVA
Sbjct: 536 LPRSNGEPSGVCSDVCLYLPISLADVLEDNIMESKDSQRLHFAISKDSANLSLGTAAVVA 595

Query: 183 RPTFCSGPLSSNCLFPEGNLISLKGNVVDIHDISSSFCDS 302
           RP  C G   S+ LFPEGNL+SL+GNVVDIH+I S F +S
Sbjct: 596 RPKSCFGTQRSSSLFPEGNLMSLEGNVVDIHEICSGFNNS 635


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/88 (35%), Positives = 49/88 (55%)
 Frame = +3

Query: 39   SDVCLYLPVNLTDLLEENIMESKYSQIQKFAISEESANISFNTGTVVARPTFCSGPLSSN 218
            SD+ L+LP N  D L  ++ + + +  +     EE+    +  G  ++     SG   ++
Sbjct: 959  SDIYLHLPANAKDSLVFDLEKQEENSTELVIKPEEAGKPCYRDG--ISSDMQTSGFHGTD 1016

Query: 219  CLFPEGNLISLKGNVVDIHDISSSFCDS 302
            CLFPEGNL S+KG+VV +HD+  S  DS
Sbjct: 1017 CLFPEGNLSSVKGHVVAVHDLHQSCIDS 1044


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/88 (35%), Positives = 49/88 (55%)
 Frame = +3

Query: 39   SDVCLYLPVNLTDLLEENIMESKYSQIQKFAISEESANISFNTGTVVARPTFCSGPLSSN 218
            SD+ L+LP N  D L  ++ + + +  +     EE+    +  G  ++     SG   ++
Sbjct: 971  SDIYLHLPANAKDSLVFDLEKQEENSTKLVIKPEEAGKPCYRDG--ISSDMQTSGFHGTD 1028

Query: 219  CLFPEGNLISLKGNVVDIHDISSSFCDS 302
            CLFPEGNL S+KG+VV +HD+  S  DS
Sbjct: 1029 CLFPEGNLSSVKGHVVAVHDLHQSCIDS 1056