BLASTX nr result

ID: Glycyrrhiza24_contig00030867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030867
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
emb|CBI35666.3| unnamed protein product [Vitis vinifera]               76   3e-12
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]    76   3e-12
ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12

>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -1

Query: 324 KDCHDFAKRVSIVTGREFVVRDANRFHHIKSGKCSCNEYW 205
           KDCHDFAKRVSIVTGRE VVRD NRFHHI SG+CSC +YW
Sbjct: 726 KDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -1

Query: 324 KDCHDFAKRVSIVTGREFVVRDANRFHHIKSGKCSCNEYW 205
           KDCH+FAKRVS+VTGRE VVRD NRFHHI SG+CSC +YW
Sbjct: 714 KDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -1

Query: 324 KDCHDFAKRVSIVTGREFVVRDANRFHHIKSGKCSCNEYW 205
           +DCH+F K+VS+VTGR+ VVRD+ RFHH KSGKCSCN+YW
Sbjct: 723 RDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -1

Query: 324 KDCHDFAKRVSIVTGREFVVRDANRFHHIKSGKCSCNEYW 205
           +DCH+F K+VS+VTGR+ VVRD+ RFHH KSGKCSCN+YW
Sbjct: 695 RDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734


>ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = -1

Query: 321 DCHDFAKRVSIVTGREFVVRDANRFHHIKSGKCSCNEYW 205
           DCH   K +SIVTGRE VVRDANRFHHIK GKCSCN+YW
Sbjct: 782 DCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820


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