BLASTX nr result

ID: Glycyrrhiza24_contig00030866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030866
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    55   5e-06
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    55   6e-06
ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|35549...    55   6e-06
ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|35549...    55   8e-06

>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/60 (50%), Positives = 36/60 (60%)
 Frame = +3

Query: 207 FLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRAKRWNFRLVSLQLKS 386
           FLP  L+++ L RLPVKSL+R KCVS+ W SLI D  F K H + A     RLV     S
Sbjct: 17  FLPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSHFELAAARTHRLVFFDTSS 76


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = +3

Query: 150 MPPNSA*NNESQYQEEGAQFLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKL 329
           +PP+S    +   +     FLP  LV+  LSRLPVKSL++ +CV + W SLI+D  F+K 
Sbjct: 29  LPPSSVQKQQGMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKK 88

Query: 330 H 332
           H
Sbjct: 89  H 89


>ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|355497932|gb|AES79135.1|
           F-box protein [Medicago truncatula]
          Length = 720

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 43/72 (59%)
 Frame = +3

Query: 177 ESQYQEEGAQFLPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRAKRWN 356
           E++ + E    LP  L+   LSR  VKSL+R KCVS+ W+S+I D  F+KLH  ++ R N
Sbjct: 15  EAEAEAEPPSVLPDELITEVLSRGDVKSLMRMKCVSKYWNSMISDPRFVKLHMKQSAR-N 73

Query: 357 FRLVSLQLKSGI 392
             L     KSGI
Sbjct: 74  AHLTLSLCKSGI 85


>ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|355499008|gb|AES80211.1|
           F-box protein [Medicago truncatula]
          Length = 445

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 210 LPHYLVLRSLSRLPVKSLVRNKCVSRRWDSLIFDKDFIKLHHDRAKRWN 356
           LP  L+   LS LPVKSLVR KCVS+ W SLI D  F+KLH +R+   N
Sbjct: 9   LPDDLIAELLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHLNRSSTRN 57


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