BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030864
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chlor...   172   3e-41
ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chlor...   167   8e-40
ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   127   7e-28
ref|XP_003626283.1| RNA pseudourine synthase [Medicago truncatul...   125   3e-27

>ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
           max]
          Length = 473

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/106 (77%), Positives = 88/106 (83%)
 Frame = -3

Query: 318 SWRCWSSHNSNTALAGETASSTIDAGXXXXXXXXXSYPKYDRLLPCPSHKSPPRIEHLVV 139
           SW C SSHNSNTALAGE   ST DAG         S+PKYDRLLPCPSHK+PPRIEHLV+
Sbjct: 41  SWGCRSSHNSNTALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVI 100

Query: 138 SEGGSVLEYICEALDLPPLFVADLIQFGAVYYALVCPQPPPNATPE 1
           SEGG VLE IC+ALDLPPL+V+DLIQFGAVYYALVCPQPPPNAT E
Sbjct: 101 SEGGPVLELICKALDLPPLYVSDLIQFGAVYYALVCPQPPPNATEE 146


>ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
           max]
          Length = 473

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/106 (76%), Positives = 87/106 (82%)
 Frame = -3

Query: 318 SWRCWSSHNSNTALAGETASSTIDAGXXXXXXXXXSYPKYDRLLPCPSHKSPPRIEHLVV 139
           SW C SSHNSNTALAGE    T DAG         S+ KYDRLLPCPSHK+PPRIEHLVV
Sbjct: 41  SWCCRSSHNSNTALAGEAEFLTTDAGILNATSSSDSFRKYDRLLPCPSHKTPPRIEHLVV 100

Query: 138 SEGGSVLEYICEALDLPPLFVADLIQFGAVYYALVCPQPPPNATPE 1
           SEGG VLE+IC+ALDLPPL+V+DLIQFGAVYYALVCPQPPPNAT E
Sbjct: 101 SEGGPVLEHICKALDLPPLYVSDLIQFGAVYYALVCPQPPPNATEE 146


>ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|222847890|gb|EEE85437.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = -3

Query: 210 YPKYDRLLPCPSHKSPPRIEHLVVSEGGSVLEYICEALDLPPLFVADLIQFGAVYYALVC 31
           YP+Y RLLPCPSH SPPRIEHLVVSE G VL+YIC+ALDLPPLFVADLI FGAV+YALVC
Sbjct: 71  YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130

Query: 30  PQPPPNATPE 1
           PQPP  ATPE
Sbjct: 131 PQPPRTATPE 140


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/70 (81%), Positives = 63/70 (90%)
 Frame = -3

Query: 210 YPKYDRLLPCPSHKSPPRIEHLVVSEGGSVLEYICEALDLPPLFVADLIQFGAVYYALVC 31
           YP+Y RLLPCPS   PPR+EHLVVSEGG VL+YI +ALDLPPLFVADLI FGAVYYALVC
Sbjct: 77  YPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVC 136

Query: 30  PQPPPNATPE 1
           P+PPP+ATPE
Sbjct: 137 PEPPPSATPE 146


>ref|XP_003626283.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501298|gb|AES82501.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 462

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = -3

Query: 210 YPKYDRLLPCPSHKSPPRIEHLVVSEGGSVLEYICEALDLPPLFVADLIQFGAVYYALVC 31
           YPKYDRLLPCPSHK PPRIEHLVVS+ G VL+YIC+ALDLP LFVADLIQFGAVY+ALV 
Sbjct: 57  YPKYDRLLPCPSHKIPPRIEHLVVSQEGPVLQYICKALDLPHLFVADLIQFGAVYFALVS 116

Query: 30  PQPPPNATPE 1
           P+PPP AT E
Sbjct: 117 PEPPPTATAE 126