BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030858
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   159   3e-37
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   153   1e-35
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   142   2e-32
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   137   1e-30

>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1449

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/120 (66%), Positives = 93/120 (77%)
 Frame = -1

Query: 362 VDNCAAGFLTHSRSDFAPRVPPIQPDDDLDSPEWAPQPPCDLGPLPNLVLTAANILELYI 183
           +DNCAAGFLTHSRSDF P  P     DDLD+ EW  +P   +GPLPNLV+TAAN+LE+Y 
Sbjct: 15  IDNCAAGFLTHSRSDFVPLQP-----DDLDAAEWPSRPRHHVGPLPNLVVTAANVLEVYA 69

Query: 182 VRLQQDNQPNKPSSATADPRRASLLDGVSGASLELVCHYRLHGNVESMAVLSIRGGDASR 3
           VRLQ+D QP     A+ D RR +LLDG++GASLEL CHYRLHGNVE+MAVLSI GGD SR
Sbjct: 70  VRLQEDQQPK---DASDDSRRGTLLDGIAGASLELECHYRLHGNVETMAVLSIGGGDVSR 126


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1447

 Score =  153 bits (387), Expect = 1e-35
 Identities = 80/120 (66%), Positives = 93/120 (77%)
 Frame = -1

Query: 362 VDNCAAGFLTHSRSDFAPRVPPIQPDDDLDSPEWAPQPPCDLGPLPNLVLTAANILELYI 183
           +DNCAAGFLTHSRSDF P  P     DDLD+ EW  +P   +G LPNLV+TAAN+LE+Y 
Sbjct: 15  IDNCAAGFLTHSRSDFVPLQP-----DDLDA-EWPSRPRHHVGSLPNLVVTAANVLEVYA 68

Query: 182 VRLQQDNQPNKPSSATADPRRASLLDGVSGASLELVCHYRLHGNVESMAVLSIRGGDASR 3
           VRLQ+D    +P  A AD RR +LLDG++GASLELVCHYRLHGNVE+MAVLSI GGD SR
Sbjct: 69  VRLQED----QPPKAAADSRRGALLDGIAGASLELVCHYRLHGNVETMAVLSIGGGDVSR 124


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/120 (56%), Positives = 96/120 (80%)
 Frame = -1

Query: 362 VDNCAAGFLTHSRSDFAPRVPPIQPDDDLDSPEWAPQPPCDLGPLPNLVLTAANILELYI 183
           +++CA+G++THSR+DF P++PPIQ D+ LDS EW P     +GP+PNL++TA ++LE+Y+
Sbjct: 15  IESCASGYITHSRADFVPQIPPIQTDN-LDS-EWPPSKR-GIGPMPNLIVTAGSVLEVYV 71

Query: 182 VRLQQDNQPNKPSSATADPRRASLLDGVSGASLELVCHYRLHGNVESMAVLSIRGGDASR 3
           VR+Q+D   ++ S ++ + +R  L+DGVSGASLELVCHYRLHGNVESM VL   GGD+SR
Sbjct: 72  VRVQEDG--SRESRSSRETKRGGLMDGVSGASLELVCHYRLHGNVESMVVLPTEGGDSSR 129


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/120 (57%), Positives = 96/120 (80%)
 Frame = -1

Query: 362 VDNCAAGFLTHSRSDFAPRVPPIQPDDDLDSPEWAPQPPCDLGPLPNLVLTAANILELYI 183
           ++NCA+GF+THSR+DFAP++ PIQ DD L+S EW  +    +GPLPNL++TAANILE+Y+
Sbjct: 15  IENCASGFVTHSRADFAPQIAPIQTDD-LES-EWPTKR--QIGPLPNLIVTAANILEVYM 70

Query: 182 VRLQQDNQPNKPSSATADPRRASLLDGVSGASLELVCHYRLHGNVESMAVLSIRGGDASR 3
           VR+Q+D+  ++ S A+A+ +R  ++ G+SGA+LELVC YRLHGNVE+M VL   GGD SR
Sbjct: 71  VRVQEDD--SRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSR 128


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/120 (57%), Positives = 96/120 (80%)
 Frame = -1

Query: 362 VDNCAAGFLTHSRSDFAPRVPPIQPDDDLDSPEWAPQPPCDLGPLPNLVLTAANILELYI 183
           ++NCA+GF+THSR+DFAP++ PIQ DD L+S EW  +    +GPLPNL++TAANILE+Y+
Sbjct: 15  IENCASGFVTHSRADFAPQIAPIQTDD-LES-EWPTKR--QIGPLPNLIVTAANILEVYM 70

Query: 182 VRLQQDNQPNKPSSATADPRRASLLDGVSGASLELVCHYRLHGNVESMAVLSIRGGDASR 3
           VR+Q+D+  ++ S A+A+ +R  ++ G+SGA+LELVC YRLHGNVE+M VL   GGD SR
Sbjct: 71  VRVQEDD--SRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSR 128