BLASTX nr result

ID: Glycyrrhiza24_contig00030842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030842
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605368.1| RING finger family protein [Medicago truncat...   169   3e-40
ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ...   155   4e-36
ref|XP_003534697.1| PREDICTED: RING-H2 finger protein ATL7-like ...   154   7e-36
ref|XP_002521749.1| protein with unknown function [Ricinus commu...   153   2e-35
ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyra...   144   1e-32

>ref|XP_003605368.1| RING finger family protein [Medicago truncatula]
           gi|355506423|gb|AES87565.1| RING finger family protein
           [Medicago truncatula]
          Length = 226

 Score =  169 bits (427), Expect = 3e-40
 Identities = 85/105 (80%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = +2

Query: 44  RPRRVDWSSLRMRPFP--DXXXXXIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCS 217
           RPRRVDWSS+RMR            AT STS LGLKKELREMLPI+VY ESFSVKDTQCS
Sbjct: 53  RPRRVDWSSIRMRSVSVLQHHHNNNAT-STSDLGLKKELREMLPIIVYNESFSVKDTQCS 111

Query: 218 VCLLDYQAEDRLQQIPACGHTFHMGCIDLWLASHSTCPLCRLSLL 352
           VCLLDYQ EDRLQQIPACGHTFHM CIDLWL+SHSTCPLCRLSLL
Sbjct: 112 VCLLDYQPEDRLQQIPACGHTFHMSCIDLWLSSHSTCPLCRLSLL 156


>ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera]
           gi|297734760|emb|CBI16994.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/102 (73%), Positives = 83/102 (81%)
 Frame = +2

Query: 44  RPRRVDWSSLRMRPFPDXXXXXIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVC 223
           R RRVDW+SLRMR          + +S   LGLKKE+REMLPI+V+KESFSV DTQCSVC
Sbjct: 46  RRRRVDWASLRMRSSMQNDADHASGVSE--LGLKKEVREMLPIIVFKESFSVSDTQCSVC 103

Query: 224 LLDYQAEDRLQQIPACGHTFHMGCIDLWLASHSTCPLCRLSL 349
           L DYQAEDRLQQIPACGHTFHM CID WLA+H+TCPLCRLSL
Sbjct: 104 LADYQAEDRLQQIPACGHTFHMDCIDHWLATHTTCPLCRLSL 145


>ref|XP_003534697.1| PREDICTED: RING-H2 finger protein ATL7-like [Glycine max]
          Length = 219

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/78 (91%), Positives = 74/78 (94%)
 Frame = +2

Query: 119 ISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTFHMGCI 298
           IST GLGL KELREMLPI+VYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTFHM CI
Sbjct: 80  ISTLGLGLNKELREMLPIIVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTFHMSCI 139

Query: 299 DLWLASHSTCPLCRLSLL 352
           DLWLA+H+TCPLCR SLL
Sbjct: 140 DLWLATHTTCPLCRFSLL 157


>ref|XP_002521749.1| protein with unknown function [Ricinus communis]
           gi|223538962|gb|EEF40559.1| protein with unknown
           function [Ricinus communis]
          Length = 337

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/103 (73%), Positives = 83/103 (80%)
 Frame = +2

Query: 44  RPRRVDWSSLRMRPFPDXXXXXIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVC 223
           R RRVDW+SLRMR            I  + LGLKKE+REMLPI+VYKESFSVKDTQC VC
Sbjct: 54  RRRRVDWASLRMRA----NLQGSDNIFRAELGLKKEVREMLPIIVYKESFSVKDTQCPVC 109

Query: 224 LLDYQAEDRLQQIPACGHTFHMGCIDLWLASHSTCPLCRLSLL 352
           L DYQAEDRLQQIPACGHTFHM CID WLA+H+TCPLCRLSL+
Sbjct: 110 LGDYQAEDRLQQIPACGHTFHMVCIDHWLANHTTCPLCRLSLV 152


>ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318332|gb|EFH48754.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 237

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/99 (68%), Positives = 80/99 (80%)
 Frame = +2

Query: 56  VDWSSLRMRPFPDXXXXXIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDY 235
           VDWSSL MR            +ST+ LGL K++REMLPIV+YKESF+VKD+QCSVCL DY
Sbjct: 61  VDWSSLGMRG--GIFVPTNNNLSTAELGLSKDVREMLPIVIYKESFTVKDSQCSVCLADY 118

Query: 236 QAEDRLQQIPACGHTFHMGCIDLWLASHSTCPLCRLSLL 352
           QAE++LQQ+PACGHTFHM CID WL SH+TCPLCRLSL+
Sbjct: 119 QAEEKLQQMPACGHTFHMECIDRWLTSHTTCPLCRLSLI 157


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