BLASTX nr result

ID: Glycyrrhiza24_contig00030819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030819
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540560.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...    87   1e-15
gb|ACU18727.1| unknown [Glycine max]                                   87   1e-15
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    84   9e-15
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...    84   9e-15
gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron...    82   3e-14

>ref|XP_003540560.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max]
          Length = 752

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 99  AMAQFPCDINGVCMACKSQPAEEEKLRCVTCDTPWHVPCLSQSSLPTNLADSNRWLCPDC 278
           +M Q PCD  G CM CK  P +EE+L CVTCDTPWHVPCL   + P  L+ + RWLCPDC
Sbjct: 2   SMQQLPCDSEGACMVCKGLPGQEERLLCVTCDTPWHVPCL--FAPPPTLSATARWLCPDC 59


>gb|ACU18727.1| unknown [Glycine max]
          Length = 512

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 99  AMAQFPCDINGVCMACKSQPAEEEKLRCVTCDTPWHVPCLSQSSLPTNLADSNRWLCPDC 278
           +M Q PCD  G CM CK  P +EE+L CVTCDTPWHVPCL   + P  L+ + RWLCPDC
Sbjct: 2   SMQQLPCDSEGACMVCKGLPGQEERLLCVTCDTPWHVPCL--FAPPPTLSATARWLCPDC 59


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +3

Query: 84  QASKEAMAQFPCDINGVCMACKSQPAEEEKLRCVTCDTPWHVPCLSQSSLPTNLADSNRW 263
           QA K  + Q PCD +G+CM CK++P++ E + C TC TPWHV CL  SS P  LA + +W
Sbjct: 16  QARKTQVTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCL--SSPPETLASTLQW 73

Query: 264 LCPDCETP 287
            CPDC TP
Sbjct: 74  DCPDCSTP 81


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +3

Query: 84  QASKEAMAQFPCDINGVCMACKSQPAEEEKLRCVTCDTPWHVPCLSQSSLPTNLADSNRW 263
           QA K  + Q PCD +G+CM CK++P++ E + C TC TPWHV CL  SS P  LA + +W
Sbjct: 16  QARKTQVTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCL--SSPPETLASTLQW 73

Query: 264 LCPDCETP 287
            CPDC TP
Sbjct: 74  DCPDCSTP 81


>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/64 (54%), Positives = 46/64 (71%)
 Frame = +3

Query: 105 AQFPCDINGVCMACKSQPAEEEKLRCVTCDTPWHVPCLSQSSLPTNLADSNRWLCPDCET 284
           +  PCD +G+CM CK  P++EEKL C TC TPWHVPCL  SS P +L+ + +W CPDC +
Sbjct: 5   SDLPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCL--SSPPQSLSSTLQWNCPDC-S 61

Query: 285 PTPT 296
           P P+
Sbjct: 62  PAPS 65


Top