BLASTX nr result

ID: Glycyrrhiza24_contig00030817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030817
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...   138   4e-31
ref|XP_003613413.1| Structural maintenance of chromosomes protei...   132   4e-29
ref|XP_003599445.1| Structural maintenance of chromosomes protei...   126   2e-27
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   114   1e-23
ref|XP_003609382.1| Structural maintenance of chromosomes protei...   108   6e-22

>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Glycine max]
          Length = 1059

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -2

Query: 248 FDAKIGEMEANLKQHENFAVQASLHFENCKKEAENCRQRLTELLNNAKSIARLTPELEKE 69
           FDAKI EMEANLKQHE FA+QASLHF+NCKKE+ENCRQ LT+ L  AKSIARLTPEL+KE
Sbjct: 749 FDAKIVEMEANLKQHEKFALQASLHFDNCKKESENCRQDLTDSLKYAKSIARLTPELKKE 808

Query: 68  FLEMPTTIEDLEAAIQDTISQA 3
           FLEMPTTIEDLEAAIQDT S+A
Sbjct: 809 FLEMPTTIEDLEAAIQDTTSEA 830


>ref|XP_003613413.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355514748|gb|AES96371.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 750

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/82 (80%), Positives = 73/82 (89%)
 Frame = -2

Query: 248 FDAKIGEMEANLKQHENFAVQASLHFENCKKEAENCRQRLTELLNNAKSIARLTPELEKE 69
           F AKIG+MEANLKQHENFA QAS HF   KKEAE C+Q+LT+LLNNAKSIA LTP+L+KE
Sbjct: 393 FAAKIGDMEANLKQHENFARQASEHFNKSKKEAEECKQKLTDLLNNAKSIAPLTPDLQKE 452

Query: 68  FLEMPTTIEDLEAAIQDTISQA 3
           FLEMPTTIE+LEAAIQDT SQA
Sbjct: 453 FLEMPTTIEELEAAIQDTTSQA 474


>ref|XP_003599445.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355488493|gb|AES69696.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 751

 Score =  126 bits (316), Expect = 2e-27
 Identities = 69/106 (65%), Positives = 75/106 (70%), Gaps = 24/106 (22%)
 Frame = -2

Query: 248 FDAKIGEMEANLKQHENFAVQASLHFENC------------------------KKEAENC 141
           FDAKIGE EA+LKQHEN A+QAS HF NC                        KKEAE C
Sbjct: 407 FDAKIGEAEASLKQHENIALQASSHFNNCEKLFKCLFVDFVRCNYVPNSCFAAKKEAEEC 466

Query: 140 RQRLTELLNNAKSIARLTPELEKEFLEMPTTIEDLEAAIQDTISQA 3
           RQ+LT+LLN AKSIARLTP+LEKEFLEMPTTIE+LEAAIQDT SQA
Sbjct: 467 RQKLTDLLNYAKSIARLTPDLEKEFLEMPTTIEELEAAIQDTTSQA 512


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
           vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
           product [Vitis vinifera]
          Length = 1051

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/82 (70%), Positives = 66/82 (80%)
 Frame = -2

Query: 248 FDAKIGEMEANLKQHENFAVQASLHFENCKKEAENCRQRLTELLNNAKSIARLTPELEKE 69
           FDAKI E+E  +KQ E FA+QASLHFENCKKE E+ RQ+L     +A+SIA +TP LEK 
Sbjct: 748 FDAKIRELEVGIKQQERFAMQASLHFENCKKEVEDHRQQLAAAKRHAESIAVITPVLEKA 807

Query: 68  FLEMPTTIEDLEAAIQDTISQA 3
           FLEMP TIEDLEAAIQDTISQA
Sbjct: 808 FLEMPATIEDLEAAIQDTISQA 829


>ref|XP_003609382.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355510437|gb|AES91579.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 661

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = -2

Query: 248 FDAKIGEMEANLKQHENFAVQASLHFENCKKEAENCRQRLTELLNNAKSIARLTPELEKE 69
           FDAKIGE EANLKQHENFA+Q SLH+ N KKEAE CRQ+LT+LLN AKSIARLTP+LEKE
Sbjct: 513 FDAKIGEAEANLKQHENFAMQTSLHYNNSKKEAEECRQKLTDLLNYAKSIARLTPDLEKE 572

Query: 68  FLE 60
           FLE
Sbjct: 573 FLE 575


Top