BLASTX nr result

ID: Glycyrrhiza24_contig00030808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030808
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811...   112   3e-23
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   109   2e-22
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   109   2e-22
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   107   8e-22
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   107   1e-21

>ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811625 [Glycine max]
          Length = 1135

 Score =  112 bits (280), Expect = 3e-23
 Identities = 45/83 (54%), Positives = 65/83 (78%)
 Frame = +2

Query: 20  FLNGPLDEEVYVSQPLGFKIPGKEDHIYRLHKALYGLNQAPRAWNKRIDAFLLQQGFKKC 199
           FLNG L+EEVY++QP G+ + G+ED +Y+L+ ALYGL Q PRAWN +ID+FL+QQ F KC
Sbjct: 183 FLNGSLEEEVYITQPPGYVVAGQEDKVYKLNTALYGLKQTPRAWNMKIDSFLVQQNFTKC 242

Query: 200 TVEFGMYVKQLSESQMVMVCLYV 268
           T+E+G+YV+     + +++C YV
Sbjct: 243 TIEYGVYVRNTDSGEFLIICFYV 265


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/88 (55%), Positives = 68/88 (77%)
 Frame = +2

Query: 5    DVKSAFLNGPLDEEVYVSQPLGFKIPGKEDHIYRLHKALYGLNQAPRAWNKRIDAFLLQQ 184
            DVKSAFLNG L EEVYVSQ  GF +P KE+H+YRL KALYGL QAPRAW  +ID++ ++ 
Sbjct: 856  DVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVEN 915

Query: 185  GFKKCTVEFGMYVKQLSESQMVMVCLYV 268
            GF++   E  +Y+K+  ++ ++++CLYV
Sbjct: 916  GFERSKSEPNLYLKRQGKNDLLIICLYV 943


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/88 (55%), Positives = 67/88 (76%)
 Frame = +2

Query: 5    DVKSAFLNGPLDEEVYVSQPLGFKIPGKEDHIYRLHKALYGLNQAPRAWNKRIDAFLLQQ 184
            DVKSAFLNG L EEVY SQP GF +P KE+H+YRL  ALYGL QAPRAW  +ID++ ++ 
Sbjct: 1027 DVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVEN 1086

Query: 185  GFKKCTVEFGMYVKQLSESQMVMVCLYV 268
            GF+K   E  +Y+K+  ++ ++++CLYV
Sbjct: 1087 GFEKSKSEPNLYLKRQGKNDLLIICLYV 1114


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +2

Query: 2   MDVKSAFLNGPLDEEVYVSQPLGFKIPGKEDHIYRLHKALYGLNQAPRAWNKRIDAFLLQ 181
           +DVKSAFLNG L+EE+Y  QPLGF+  GKEDH+ RLHKALYGL QAPRAW  RID F  +
Sbjct: 571 LDVKSAFLNGTLEEEIYAEQPLGFEEEGKEDHVLRLHKALYGLKQAPRAWYSRIDEFFQR 630

Query: 182 QGFKKCTVEFGMYVKQLSESQMVMVCLYV 268
           + F +   +  +Y K++   ++++VC+YV
Sbjct: 631 ENFTRSDNDHALYTKEVL-GKLLVVCIYV 658


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/89 (55%), Positives = 65/89 (73%)
 Frame = +2

Query: 2    MDVKSAFLNGPLDEEVYVSQPLGFKIPGKEDHIYRLHKALYGLNQAPRAWNKRIDAFLLQ 181
            MDVKSAFLNG L+EEVY+ QP G+ + G+ED + RL KALYGL QAPRAWN RID +  +
Sbjct: 945  MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKE 1004

Query: 182  QGFKKCTVEFGMYVKQLSESQMVMVCLYV 268
            + F KC  E  +Y+K + +  +++ CLYV
Sbjct: 1005 KDFIKCPYEHALYIK-IQKEDILIACLYV 1032


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