BLASTX nr result

ID: Glycyrrhiza24_contig00030807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030807
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528044.1| PREDICTED: ATP-dependent zinc metalloproteas...    92   6e-17
ref|XP_003523231.1| PREDICTED: ATP-dependent zinc metalloproteas...    90   2e-16
ref|XP_002517243.1| Mitochondrial respiratory chain complexes as...    73   2e-11
ref|XP_004163052.1| PREDICTED: ATP-dependent zinc metalloproteas...    71   8e-11
ref|XP_004148651.1| PREDICTED: ATP-dependent zinc metalloproteas...    71   8e-11

>ref|XP_003528044.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Glycine
           max]
          Length = 847

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 5/73 (6%)
 Frame = -3

Query: 247 PRNCTNQCKLRVNASKSNSRSDTAA-----SNEEDAKSAQLFEKLKEAERKRVNDLEELE 83
           PRN TN+CKLR+ AS  NS SDTA+       E+DA+SAQLFEKLKE ERKR+N+LEE +
Sbjct: 43  PRNFTNRCKLRITAS--NSPSDTASPKQEQEQEQDAESAQLFEKLKETERKRMNELEEFD 100

Query: 82  RKANLQLERQLVM 44
           +KAN+QLERQLVM
Sbjct: 101 KKANVQLERQLVM 113


>ref|XP_003523231.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Glycine
           max]
          Length = 843

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 9/81 (11%)
 Frame = -3

Query: 259 PHNKPR---------NCTNQCKLRVNASKSNSRSDTAASNEEDAKSAQLFEKLKEAERKR 107
           PH+ PR         N +N+CKLR+ AS S S S T  + E+DA+SAQLFEKLKEAERKR
Sbjct: 30  PHSSPRFLTTTFPSRNFSNRCKLRITASNSLSDS-TNPNQEQDAESAQLFEKLKEAERKR 88

Query: 106 VNDLEELERKANLQLERQLVM 44
           +N+LEE ++KAN+QLERQLVM
Sbjct: 89  MNELEEFDKKANVQLERQLVM 109


>ref|XP_002517243.1| Mitochondrial respiratory chain complexes assembly protein AFG3,
           putative [Ricinus communis] gi|223543614|gb|EEF45143.1|
           Mitochondrial respiratory chain complexes assembly
           protein AFG3, putative [Ricinus communis]
          Length = 802

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
 Frame = -3

Query: 250 KPRNCTNQCKLRVNASKSNSRS------DTAASNEEDAKSAQLFEKLKEAERKRVNDLEE 89
           K    T+Q  L + ++ S S S            EEDA+SAQLFEKLKE ER+RVN+LEE
Sbjct: 41  KSNKLTSQNALIIPSAASTSNSVVQQQQQEEEGEEEDAESAQLFEKLKEKERQRVNELEE 100

Query: 88  LERKANLQLERQLVM 44
           LERKAN+QLERQLV+
Sbjct: 101 LERKANVQLERQLVL 115


>ref|XP_004163052.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 784

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/56 (67%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -3

Query: 208 ASKSNSRSDTAASN-EEDAKSAQLFEKLKEAERKRVNDLEELERKANLQLERQLVM 44
           AS S++ +  A+ N EED +SAQLFEK+K+AER+R+N LEEL+RKANLQLERQLVM
Sbjct: 69  ASSSDTDAVVASPNVEEDDESAQLFEKVKDAERQRINKLEELQRKANLQLERQLVM 124


>ref|XP_004148651.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 855

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/56 (67%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -3

Query: 208 ASKSNSRSDTAASN-EEDAKSAQLFEKLKEAERKRVNDLEELERKANLQLERQLVM 44
           AS S++ +  A+ N EED +SAQLFEK+K+AER+R+N LEEL+RKANLQLERQLVM
Sbjct: 69  ASSSDTDAVVASPNVEEDDESAQLFEKVKDAERQRINKLEELQRKANLQLERQLVM 124


Top