BLASTX nr result

ID: Glycyrrhiza24_contig00030797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030797
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535147.1| PREDICTED: transcription factor GAMYB-like [...    97   2e-18
gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japo...    92   4e-17
ref|XP_003542525.1| PREDICTED: transcription repressor MYB4-like...    81   8e-14
gb|ACU21422.1| unknown [Glycine max]                                   81   8e-14
ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13

>ref|XP_003535147.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 320

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
 Frame = -2

Query: 268 QVNSSGFMFGGEASCSSS-DGSCNYQ----VKEAELGYGVDGTFSDH--AGVVDYLYS-- 116
           QVN+SGFM G E SCSSS DGSCN      VKEAELG+  DGTF D    G   YL S  
Sbjct: 195 QVNNSGFMLGCETSCSSSSDGSCNNNQINHVKEAELGFIGDGTFCDQIIGGGFSYLNSGV 254

Query: 115 EVEDTQKLMLSNAGRGSGWTVEQSSRLWGENPSDYGLE 2
           E+EDTQKL+ SNAG+ +    ++ SRLWGE+P +YGLE
Sbjct: 255 ELEDTQKLVPSNAGKVNSGVTDEESRLWGESPLEYGLE 292


>gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 224

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
 Frame = -2

Query: 268 QVNSSGFMFGGEA-SCSSS-DGSCNYQ---VKEAELGYG---VDGTFSDHAGVVDYLYSE 113
           Q +S+ F+FGGE  SCSSS DGSCN +   V E +LGYG   V  TF +  G VDYLY+ 
Sbjct: 101 QFSSNSFVFGGETTSCSSSSDGSCNNKTSHVTEPDLGYGEGCVGSTFMEQIGGVDYLYNG 160

Query: 112 VEDTQKLMLSNAGRGSGWTVEQSSRLWGENPSDYGLE 2
           VEDTQKLM +N    SGWT E+ + LW ENP D GLE
Sbjct: 161 VEDTQKLMFNNGDGVSGWT-EKQNGLWEENPMDNGLE 196


>ref|XP_003542525.1| PREDICTED: transcription repressor MYB4-like [Glycine max]
          Length = 305

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 57/94 (60%), Positives = 63/94 (67%), Gaps = 8/94 (8%)
 Frame = -2

Query: 259 SSGFMFGGEASCSSS-DGSCNYQ----VKEAELGYGVDGTFSDHA-GVVDYLYSEVED-- 104
           SS FM   E SCSSS DGSCN      VKEAELGY  DGTF D   G + YL S VED  
Sbjct: 188 SSVFM---ETSCSSSSDGSCNNNQINHVKEAELGYVGDGTFGDQIIGRLSYLNSGVEDQD 244

Query: 103 TQKLMLSNAGRGSGWTVEQSSRLWGENPSDYGLE 2
           T KL+ SNAGR SG T E++ RLWGE+P +YGLE
Sbjct: 245 TLKLVPSNAGRVSGVTDEET-RLWGESPLEYGLE 277


>gb|ACU21422.1| unknown [Glycine max]
          Length = 189

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 57/94 (60%), Positives = 63/94 (67%), Gaps = 8/94 (8%)
 Frame = -2

Query: 259 SSGFMFGGEASCSSS-DGSCNYQ----VKEAELGYGVDGTFSDHA-GVVDYLYSEVED-- 104
           SS FM   E SCSSS DGSCN      VKEAELGY  DGTF D   G + YL S VED  
Sbjct: 72  SSVFM---ETSCSSSSDGSCNNNQINHVKEAELGYVGDGTFGDQIIGRLSYLNSGVEDQD 128

Query: 103 TQKLMLSNAGRGSGWTVEQSSRLWGENPSDYGLE 2
           T KL+ SNAGR SG T E++ RLWGE+P +YGLE
Sbjct: 129 TLKLVPSNAGRVSGVTDEET-RLWGESPLEYGLE 161


>ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|222867542|gb|EEF04673.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 8/97 (8%)
 Frame = -2

Query: 268 QVNSSGFMFGGEASCSSSDGSCNYQV----KEAELGYGVDGTFSDHAGVVDYLYSEVEDT 101
           QV  +  MFGGEASCSSSDGSC+ Q+    +E E G G +   +   G+ +YL++ VED 
Sbjct: 209 QVKDNLIMFGGEASCSSSDGSCSNQMSHVKEEYEHGDGANNN-TGQVGLQNYLHNRVEDD 267

Query: 100 QKLMLSNAGRG----SGWTVEQSSRLWGENPSDYGLE 2
           QKLM+S+   G    +GWT +Q   LW ENP DYGLE
Sbjct: 268 QKLMVSSGFAGHDVLNGWTGKQIG-LWEENPLDYGLE 303


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