BLASTX nr result

ID: Glycyrrhiza24_contig00030774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030774
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   161   5e-38
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   149   2e-34
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   149   2e-34

>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1209

 Score =  161 bits (408), Expect = 5e-38
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = +2

Query: 2    ILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEIDHGGYEY 181
            ILTVVAGLSVRDPFLTPLDK+DLAE AKSQFCGAYSDHLALVRAYEGW+DAE+D GGYEY
Sbjct: 824  ILTVVAGLSVRDPFLTPLDKRDLAEEAKSQFCGAYSDHLALVRAYEGWRDAEMDLGGYEY 883

Query: 182  CWKNFLSLQSMKAIDALRREFIGLLK 259
            CWKNFLS QSMKAIDALRREFI L+K
Sbjct: 884  CWKNFLSSQSMKAIDALRREFICLVK 909


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/85 (85%), Positives = 77/85 (90%)
 Frame = +2

Query: 2   ILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEIDHGGYEY 181
           +LTVVAGLSVRDPFL PLDKKDLAEAAKSQF G YSDHLALVRAYEGWKDAE D  GYEY
Sbjct: 669 VLTVVAGLSVRDPFLMPLDKKDLAEAAKSQFSGDYSDHLALVRAYEGWKDAERDLSGYEY 728

Query: 182 CWKNFLSLQSMKAIDALRREFIGLL 256
           CWKNFLS+QSMKAID+LR+EF  LL
Sbjct: 729 CWKNFLSVQSMKAIDSLRKEFFSLL 753


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/86 (84%), Positives = 77/86 (89%)
 Frame = +2

Query: 2    ILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEIDHGGYEY 181
            ILT+VAGLSVRDPFLTPLDKKDLAEAAK+QF   YSDHLALVRAYEGWKDAE D  GYEY
Sbjct: 793  ILTIVAGLSVRDPFLTPLDKKDLAEAAKAQFSHDYSDHLALVRAYEGWKDAEKDQIGYEY 852

Query: 182  CWKNFLSLQSMKAIDALRREFIGLLK 259
            CWKNFLS QSMKAID+LR+EF  LLK
Sbjct: 853  CWKNFLSAQSMKAIDSLRKEFFSLLK 878


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/86 (84%), Positives = 77/86 (89%)
 Frame = +2

Query: 2    ILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEIDHGGYEY 181
            ILT+VAGLSVRDPFLTPLDKKDLAEAAK+QF   YSDHLALVRAYEGWKDAE D  GYEY
Sbjct: 807  ILTIVAGLSVRDPFLTPLDKKDLAEAAKAQFSHDYSDHLALVRAYEGWKDAEKDQIGYEY 866

Query: 182  CWKNFLSLQSMKAIDALRREFIGLLK 259
            CWKNFLS QSMKAID+LR+EF  LLK
Sbjct: 867  CWKNFLSAQSMKAIDSLRKEFFSLLK 892


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/86 (81%), Positives = 79/86 (91%)
 Frame = +2

Query: 2    ILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAYEGWKDAEIDHGGYEY 181
            +LT+VAGLSVRDPFLTP+DKKDLAEAAKSQF   YSDHLALVRAYEGWKDAE +  GY+Y
Sbjct: 788  VLTIVAGLSVRDPFLTPMDKKDLAEAAKSQFSCDYSDHLALVRAYEGWKDAERNFAGYDY 847

Query: 182  CWKNFLSLQSMKAIDALRREFIGLLK 259
            CWKNFLS+QSMKAID+LR+EF+ LLK
Sbjct: 848  CWKNFLSMQSMKAIDSLRKEFLSLLK 873


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