BLASTX nr result

ID: Glycyrrhiza24_contig00030771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030771
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   206   2e-51
ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   193   1e-47
ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   188   3e-46
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   147   1e-33
ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32

>ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 871

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/125 (78%), Positives = 112/125 (89%)
 Frame = -2

Query: 386 ETLLVAEVYNNCIIRFLEDPADSLSLIRDADKLVAYRFMKDNEDAPLVIFINQQMVEHYV 207
           E LLVAEVYNN IIRFLEDPADSLSLIRDADKLVAYRF KDN D PLV+FINQ+M E Y+
Sbjct: 502 EALLVAEVYNNRIIRFLEDPADSLSLIRDADKLVAYRFPKDNVDTPLVVFINQRMEEQYI 561

Query: 206 HGKLAPNWKAFGIPIVARLCNAMNGSDLRNLYLKWFRPIQISVEEALENCVVSKRTDDVA 27
           +GKLAPNWKAFGIP+VA LCN +NGSDLRNLYLKWF P+Q  +EE LE+CVVS+RT++VA
Sbjct: 562 YGKLAPNWKAFGIPVVASLCNIVNGSDLRNLYLKWFHPLQDLIEETLESCVVSERTEEVA 621

Query: 26  KMEGV 12
           ++EGV
Sbjct: 622 EIEGV 626


>ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 874

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/128 (75%), Positives = 108/128 (84%)
 Frame = -2

Query: 386 ETLLVAEVYNNCIIRFLEDPADSLSLIRDADKLVAYRFMKDNEDAPLVIFINQQMVEHYV 207
           ETLLVAEVYNNCIIRFLEDP DSLSLIRDADKLVAYRF+K N DAPLV+FINQ+M E YV
Sbjct: 510 ETLLVAEVYNNCIIRFLEDPTDSLSLIRDADKLVAYRFLKCNVDAPLVVFINQRMEEQYV 569

Query: 206 HGKLAPNWKAFGIPIVARLCNAMNGSDLRNLYLKWFRPIQISVEEALENCVVSKRTDDVA 27
           +GK   NWKAFGIP+V RL +  NGSDLRNLYLKWF P Q  +EEALENC+VSK T++ A
Sbjct: 570 YGKQTLNWKAFGIPVVDRLYSVTNGSDLRNLYLKWFYPFQNPIEEALENCLVSKETEEDA 629

Query: 26  KMEGVTTP 3
           + E VTTP
Sbjct: 630 ETE-VTTP 636


>ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 872

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/126 (73%), Positives = 103/126 (81%)
 Frame = -2

Query: 386 ETLLVAEVYNNCIIRFLEDPADSLSLIRDADKLVAYRFMKDNEDAPLVIFINQQMVEHYV 207
           ETLLVAEVYNNCIIRFLEDP DSLSLIRDADKLVAYRF+K N DAPLV+FINQ+M E YV
Sbjct: 508 ETLLVAEVYNNCIIRFLEDPTDSLSLIRDADKLVAYRFLKYNADAPLVVFINQRMEEQYV 567

Query: 206 HGKLAPNWKAFGIPIVARLCNAMNGSDLRNLYLKWFRPIQISVEEALENCVVSKRTDDVA 27
           +GKL  NWKAFGIP+V  L +  NGSDLRNLYLKWF P Q  +EEALENC+V K T++  
Sbjct: 568 YGKLTLNWKAFGIPVVDMLYSVTNGSDLRNLYLKWFYPFQNPIEEALENCLVFKETEEDT 627

Query: 26  KMEGVT 9
           + E  T
Sbjct: 628 ETEATT 633


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
           vinifera]
          Length = 882

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/130 (55%), Positives = 98/130 (75%), Gaps = 2/130 (1%)
 Frame = -2

Query: 386 ETLLVAEVYNNCIIRFLEDPADSLSLIRDADKLVAYRFMKDNEDAPLVIFINQQMVEHYV 207
           ETLLVAE+YNN IIR+LEDP DSLSLIRD D+LVAYR  K   +  LV+F++Q++ E Y+
Sbjct: 513 ETLLVAEIYNNRIIRYLEDPTDSLSLIRDGDRLVAYRLPKVTNEDRLVVFMHQRIDEQYI 572

Query: 206 HGKLAPNWKAFGIPIVARLCNAMNGSDLRNLYLKWFRPIQISVEEALENCVVSKRT--DD 33
           HGKL+ +WKAFGIP+VAR+CN++NGSD+ NLYLK   P QI+ E    N   S++T  ++
Sbjct: 573 HGKLSSSWKAFGIPLVARICNSVNGSDVYNLYLKLINPFQITSEGISNNSDSSEKTVIEE 632

Query: 32  VAKMEGVTTP 3
           V +++   +P
Sbjct: 633 VKELKDAISP 642


>ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|222847020|gb|EEE84567.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/122 (57%), Positives = 91/122 (74%)
 Frame = -2

Query: 386 ETLLVAEVYNNCIIRFLEDPADSLSLIRDADKLVAYRFMKDNEDAPLVIFINQQMVEHYV 207
           ETLLVAEVYNN IIRFLE+PAD LSLIRD D+LVAYR  KD +++PLV+F++Q M EHY 
Sbjct: 257 ETLLVAEVYNNRIIRFLEEPADYLSLIRDNDRLVAYRLKKDFDNSPLVVFMHQHMEEHYF 316

Query: 206 HGKLAPNWKAFGIPIVARLCNAMNGSDLRNLYLKWFRPIQISVEEALENCVVSKRTDDVA 27
           HGKL  +WKAFGIP+V  + N ++GSD+ NLYL+   P +I  +  L+N + S   ++V 
Sbjct: 317 HGKLTSSWKAFGIPLVGNVHNFVSGSDIHNLYLQLVAPFRIPPDGTLDNDLDSTTIEEVE 376

Query: 26  KM 21
            M
Sbjct: 377 GM 378


Top