BLASTX nr result

ID: Glycyrrhiza24_contig00030765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030765
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   150   1e-34
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   142   2e-32
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   135   4e-30
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   135   4e-30

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/79 (93%), Positives = 77/79 (97%)
 Frame = -3

Query: 240 GRKETAVYAADVQTGIVIRCKVFIDNISRIHIFHNYIKLDLDGLSTLRVRAFDSEENVFS 61
           GRKETAVYAAD+QTGIVIRCKVFIDNISRI IFHN IKLDL+GL+TLRVRAFDSEENVFS
Sbjct: 89  GRKETAVYAADLQTGIVIRCKVFIDNISRIQIFHNSIKLDLEGLATLRVRAFDSEENVFS 148

Query: 60  SLVGLQFMWSLMPEANGLP 4
           SLVGLQFMWSLMPEANGLP
Sbjct: 149 SLVGLQFMWSLMPEANGLP 167


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/79 (87%), Positives = 73/79 (92%)
 Frame = -3

Query: 240 GRKETAVYAADVQTGIVIRCKVFIDNISRIHIFHNYIKLDLDGLSTLRVRAFDSEENVFS 61
           GRKETAVYAAD+ TGIV+RCKVFIDNISRI IFHN IKLDLDGL+TLRVRAFDSEENVFS
Sbjct: 171 GRKETAVYAADIHTGIVVRCKVFIDNISRIQIFHNSIKLDLDGLATLRVRAFDSEENVFS 230

Query: 60  SLVGLQFMWSLMPEANGLP 4
           SLVGLQFMW L PE +GLP
Sbjct: 231 SLVGLQFMWQLRPETDGLP 249


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/79 (87%), Positives = 73/79 (92%)
 Frame = -3

Query: 240 GRKETAVYAADVQTGIVIRCKVFIDNISRIHIFHNYIKLDLDGLSTLRVRAFDSEENVFS 61
           GRKETAVYAAD+ TGIV+RCKVFIDNISRI IFHN IKLDLDGL+TLRVRAFDSEENVFS
Sbjct: 96  GRKETAVYAADIHTGIVVRCKVFIDNISRIQIFHNSIKLDLDGLATLRVRAFDSEENVFS 155

Query: 60  SLVGLQFMWSLMPEANGLP 4
           SLVGLQFMW L PE +GLP
Sbjct: 156 SLVGLQFMWQLRPETDGLP 174


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
           sativus]
          Length = 1758

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/77 (87%), Positives = 69/77 (89%)
 Frame = -3

Query: 240 GRKETAVYAADVQTGIVIRCKVFIDNISRIHIFHNYIKLDLDGLSTLRVRAFDSEENVFS 61
           GRKETAVYAADV TG VIRCKVFIDN SRI IFHN IKLDLDGL+TLRVRAFDSEENVFS
Sbjct: 80  GRKETAVYAADVHTGNVIRCKVFIDNFSRIQIFHNSIKLDLDGLATLRVRAFDSEENVFS 139

Query: 60  SLVGLQFMWSLMPEANG 10
           SLVGLQFMW L+PE  G
Sbjct: 140 SLVGLQFMWHLIPETEG 156


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
           210-like [Cucumis sativus]
          Length = 2257

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/77 (87%), Positives = 69/77 (89%)
 Frame = -3

Query: 240 GRKETAVYAADVQTGIVIRCKVFIDNISRIHIFHNYIKLDLDGLSTLRVRAFDSEENVFS 61
           GRKETAVYAADV TG VIRCKVFIDN SRI IFHN IKLDLDGL+TLRVRAFDSEENVFS
Sbjct: 80  GRKETAVYAADVHTGNVIRCKVFIDNFSRIQIFHNSIKLDLDGLATLRVRAFDSEENVFS 139

Query: 60  SLVGLQFMWSLMPEANG 10
           SLVGLQFMW L+PE  G
Sbjct: 140 SLVGLQFMWHLIPETEG 156