BLASTX nr result

ID: Glycyrrhiza24_contig00030747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030747
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ...   132   4e-29
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ...   131   6e-29
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        130   1e-28
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...   130   1e-28
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp...   130   1e-28

>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509063|gb|AES90205.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = +3

Query: 3    EKLAMAFGILNLPPGRTVRVTKNRRVCGDCHEMGKFMSKTTRREIVLRDSNRFHHFKDGL 182
            EK AMAFGILNLPPGRTVRV+KN+RVCGDCHEMGKFMSKTT+REIVLRDSNRFHHFKDGL
Sbjct: 1078 EKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGL 1137

Query: 183  CSCR 194
            CSCR
Sbjct: 1138 CSCR 1141


>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523812|gb|AET04266.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = +3

Query: 3   EKLAMAFGILNLPPGRTVRVTKNRRVCGDCHEMGKFMSKTTRREIVLRDSNRFHHFKDGL 182
           EK AMAFGILNLPPGRTVRV+KNRRVCGDCHEMGKFMSKTT+ EIVLRDSNRFHHFKDGL
Sbjct: 803 EKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGL 862

Query: 183 CSCR 194
           CSCR
Sbjct: 863 CSCR 866


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EKLAMAFGILNLPPGRTVRVTKNRRVCGDCHEMGKFMSKTTRREIVLRDSNRFHHFKDGL 182
           EKLAMAFG+L LPP +T+RVTKN RVCGDCHEM KFMSK TRREIVLRDSNRFHHFKDG 
Sbjct: 739 EKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGY 798

Query: 183 CSCRGFW 203
           CSCRGFW
Sbjct: 799 CSCRGFW 805


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EKLAMAFGILNLPPGRTVRVTKNRRVCGDCHEMGKFMSKTTRREIVLRDSNRFHHFKDGL 182
           EKLAMAFG+L LPP +T+RVTKN RVCGDCHEM KFMSK TRREIVLRDSNRFHHFKDG 
Sbjct: 601 EKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGY 660

Query: 183 CSCRGFW 203
           CSCRGFW
Sbjct: 661 CSCRGFW 667


>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   EKLAMAFGILNLPPGRTVRVTKNRRVCGDCHEMGKFMSKTTRREIVLRDSNRFHHFKDGL 182
           EKLAMAFG+L LPP +T+RVTKN RVCGDCHEM KFMSK TRREIVLRDSNRFHHFKDG 
Sbjct: 739 EKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGY 798

Query: 183 CSCRGFW 203
           CSCRGFW
Sbjct: 799 CSCRGFW 805


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