BLASTX nr result

ID: Glycyrrhiza24_contig00030742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030742
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago tru...   139   2e-31
ref|XP_003537164.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   139   2e-31
ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   135   5e-30
ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydro...   135   5e-30
gb|AFK41814.1| unknown [Lotus japonicus]                              133   2e-29

>ref|XP_003599260.1| tRNA-dihydrouridine synthase A [Medicago truncatula]
           gi|355488308|gb|AES69511.1| tRNA-dihydrouridine synthase
           A [Medicago truncatula]
          Length = 294

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = +1

Query: 1   NAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFIIHSRKALLKGLSPAENRSIPPL 180
           N PVSVKCRIGVDDHDSYNELCDFIYKVSSLSPA+HFIIHSRKALLKGLSPAENRSIPPL
Sbjct: 134 NVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGLSPAENRSIPPL 193

Query: 181 KYEYFYG 201
           KYEYFYG
Sbjct: 194 KYEYFYG 200


>ref|XP_003537164.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max]
          Length = 372

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = +1

Query: 1   NAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFIIHSRKALLKGLSPAENRSIPPL 180
           N PV+VKCRIGVDDHDSYNELCDFIYKVSSLSPAKHF+IHSRKALLKGLSPAENRSIPPL
Sbjct: 134 NVPVTVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFVIHSRKALLKGLSPAENRSIPPL 193

Query: 181 KYEYFYG 201
           KYEYFYG
Sbjct: 194 KYEYFYG 200


>ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max]
          Length = 430

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   NAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFIIHSRKALLKGLSPAENRSIPPL 180
           N PVSVKCRIGVDDHDSYNELCDFIY+VSSLSP KHFIIHSRKALL G+SPAENRSIPPL
Sbjct: 190 NVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPL 249

Query: 181 KYEYFYG 201
           KYEYFYG
Sbjct: 250 KYEYFYG 256


>ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase A-like
           [Glycine max]
          Length = 437

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   NAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFIIHSRKALLKGLSPAENRSIPPL 180
           N PVSVKCRIGVDDHDSYNELCDFIY+VSSLSP KHFIIHSRKALL G+SPAENRSIPPL
Sbjct: 190 NVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPL 249

Query: 181 KYEYFYG 201
           KYEYFYG
Sbjct: 250 KYEYFYG 256


>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   NAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFIIHSRKALLKGLSPAENRSIPPL 180
           N PVSVKCRIGVDDHDSY+ELCDFI+KVSSLSP KHFIIHSRKALL G+SPAENRSIPPL
Sbjct: 184 NVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPL 243

Query: 181 KYEYFYG 201
           KYEYFYG
Sbjct: 244 KYEYFYG 250


Top