BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030737
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   213   2e-53
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39
ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...    52   2e-06

>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  213 bits (542), Expect = 2e-53
 Identities = 111/169 (65%), Positives = 126/169 (74%), Gaps = 5/169 (2%)
 Frame = -1

Query: 494 NSPNPKTVSPKXXXXXXXXXXXXXXXXXXXTP---FYSLLSDLVSYPTDTN--IDRVLDR 330
           N  NP  ++PK                   +P    Y+LL+DLVS PTDT+  ID VLD 
Sbjct: 34  NKTNPNLINPKSPSSKSPRPTSSKPSISNLSPKTTLYTLLTDLVSCPTDTDTAIDNVLDC 93

Query: 329 YKGELNNNLVLRVLMSYNHLGRAKTLKFFSFAGTHMGFQFDDSVVEYMVDFLGRRKLFDD 150
           YK EL ++LVLRVLMSYNHLGR KTLKFFS+AGT M FQFDDSV+EYMVDF GRRKLFDD
Sbjct: 94  YKAELTSDLVLRVLMSYNHLGRTKTLKFFSWAGTKMDFQFDDSVIEYMVDFFGRRKLFDD 153

Query: 149 IKCLFMTIVSHNGKVSPKALSICIRFLGREGRVQEALSLFEEMETVFGC 3
           IKCL MTIV+H G+VS KALSICIRFLGREGR+ E LSLF+EME+VFGC
Sbjct: 154 IKCLLMTIVAHKGQVSSKALSICIRFLGREGRINEVLSLFDEMESVFGC 202


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  166 bits (419), Expect = 3e-39
 Identities = 79/130 (60%), Positives = 104/130 (80%)
 Frame = -1

Query: 392 SLLSDLVSYPTDTNIDRVLDRYKGELNNNLVLRVLMSYNHLGRAKTLKFFSFAGTHMGFQ 213
           SLLS+      + ++D +L R+K  L+++ VL++LM+Y  LGRAKTL+FFS++G  MGF+
Sbjct: 72  SLLSNKNPQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGLQMGFR 131

Query: 212 FDDSVVEYMVDFLGRRKLFDDIKCLFMTIVSHNGKVSPKALSICIRFLGREGRVQEALSL 33
           FD SVVEYM DFLGRRKLFDD+KCL +T++SH G++S +  SICIRFLGR+GRV+EAL L
Sbjct: 132 FDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREALCL 191

Query: 32  FEEMETVFGC 3
           FEEME  FGC
Sbjct: 192 FEEMEPKFGC 201


>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  157 bits (396), Expect = 2e-36
 Identities = 72/105 (68%), Positives = 90/105 (85%)
 Frame = -1

Query: 317 LNNNLVLRVLMSYNHLGRAKTLKFFSFAGTHMGFQFDDSVVEYMVDFLGRRKLFDDIKCL 138
           LN+++VL+VLM+Y  LGR KTL+FFS+AG  MGF+FDD V+EYMVDFLGRRKLFDD+KC 
Sbjct: 2   LNSDIVLQVLMNYKQLGRVKTLEFFSWAGMQMGFKFDDCVIEYMVDFLGRRKLFDDMKCF 61

Query: 137 FMTIVSHNGKVSPKALSICIRFLGREGRVQEALSLFEEMETVFGC 3
            MT++ HNG+V+ +A SICIRFLGR+GR +EAL LF+EMET F C
Sbjct: 62  LMTVLFHNGRVTCRAFSICIRFLGRQGRFREALCLFQEMETKFNC 106


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356576706|ref|XP_003556471.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 509

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
 Frame = -1

Query: 395 YSLLSDLVSYPTDTNIDRVLDRYKGELNN-----NLVLRVLMSYNHLGRAKTLKFFSFAG 231
           +SL S+L+  P D++   V  R     ++     NL+L+ L   +  GR   L F  +  
Sbjct: 69  HSLSSELLKEP-DSDALSVSQRLHLSFSHITPTPNLILQTLNLSHESGRT-VLGFHQWLS 126

Query: 230 THMGFQFDDSVVEYMVDFLGRRKLFDDIKCLFMTIVSHNGKVSPKALSICIRFLGREGRV 51
           ++  F   D  + Y VD+ GRRK   D K     + + +    PK L+  I  L R GR 
Sbjct: 127 SNPQFSHTDDTLSYFVDYFGRRK---DFKATHDVLSAASPAAGPKTLASAIDRLVRAGRP 183

Query: 50  QEALSLFEEMETVFG 6
            +A+  FE ME  +G
Sbjct: 184 SQAVQFFERMERDYG 198



 Score = 25.4 bits (54), Expect(2) = 2e-06
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 507 SPKQ*FPKP*NRFPQIPSTHFLPRFEFTPFTQF 409
           SP    P P   FPQ PS+HF  R   TP + F
Sbjct: 23  SPTPIHPPP--LFPQQPSSHFHSRTLLTPSSLF 53