BLASTX nr result

ID: Glycyrrhiza24_contig00030718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030718
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   194   6e-48
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   185   4e-45
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   158   4e-37
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              158   4e-37
emb|CAN77167.1| hypothetical protein VITISV_029836 [Vitis vinifera]   158   4e-37

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
           gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
           protein [Medicago truncatula]
          Length = 1967

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/112 (87%), Positives = 101/112 (90%)
 Frame = +2

Query: 2   FPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISSLFEISSNLQADDVSHIVEAQQAV 181
           FP RTVELVRLLSSL EGTWPAECVY FLDRSVGISSL EISS+L ADDV HI+EA  AV
Sbjct: 476 FPVRTVELVRLLSSLSEGTWPAECVYTFLDRSVGISSLLEISSDLLADDVYHILEAPHAV 535

Query: 182 QVPGIEGLFVPSGTRGRVLKVVGENTALVRWEYSPSGVFVLLLHLAQDMYFD 337
           QVPGIEGLF PSGTRGRVLKVVGE TALVRWEYSPSGVFVLLLHLAQDMY +
Sbjct: 536 QVPGIEGLFAPSGTRGRVLKVVGEKTALVRWEYSPSGVFVLLLHLAQDMYLN 587


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/112 (80%), Positives = 103/112 (91%)
 Frame = +2

Query: 2   FPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISSLFEISSNLQADDVSHIVEAQQAV 181
           FPFRT+ELV+LLSSLCEGTWPAECVYNFL+RSVGISSLFEISS+L+      +VEAQQAV
Sbjct: 458 FPFRTLELVQLLSSLCEGTWPAECVYNFLNRSVGISSLFEISSDLE------VVEAQQAV 511

Query: 182 QVPGIEGLFVPSGTRGRVLKVVGENTALVRWEYSPSGVFVLLLHLAQDMYFD 337
           QVPG+EG F+P+GTRG VL+VVGENTALVRWEYSPSG+FVLLLHLAQ+MY +
Sbjct: 512 QVPGVEGFFIPAGTRGSVLRVVGENTALVRWEYSPSGMFVLLLHLAQEMYLN 563


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/112 (67%), Positives = 90/112 (80%)
 Frame = +2

Query: 2   FPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISSLFEISSNLQADDVSHIVEAQQAV 181
           FP RTVELV  LS+LCEGTWPAECVYNFLD+SVGISSL EI+S+   D++S I+E +  +
Sbjct: 470 FPIRTVELVGFLSALCEGTWPAECVYNFLDKSVGISSLLEITSDSLVDNISQIIETRVPL 529

Query: 182 QVPGIEGLFVPSGTRGRVLKVVGENTALVRWEYSPSGVFVLLLHLAQDMYFD 337
            VPG+EGL +PS TRG VLKV+  NTALVRWEY+ SGV VLLL LAQ +Y D
Sbjct: 530 HVPGVEGLIIPSQTRGHVLKVIDGNTALVRWEYTQSGVLVLLLRLAQRLYLD 581


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/112 (67%), Positives = 90/112 (80%)
 Frame = +2

Query: 2   FPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISSLFEISSNLQADDVSHIVEAQQAV 181
           FP RTVELV  LS+LCEGTWPAECVYNFLD+SVGISSL EI+S+   D++S I+E +  +
Sbjct: 470 FPIRTVELVGFLSALCEGTWPAECVYNFLDKSVGISSLLEITSDSLVDNISQIIETRVPL 529

Query: 182 QVPGIEGLFVPSGTRGRVLKVVGENTALVRWEYSPSGVFVLLLHLAQDMYFD 337
            VPG+EGL +PS TRG VLKV+  NTALVRWEY+ SGV VLLL LAQ +Y D
Sbjct: 530 HVPGVEGLIIPSQTRGHVLKVIDGNTALVRWEYTQSGVLVLLLRLAQRLYLD 581


>emb|CAN77167.1| hypothetical protein VITISV_029836 [Vitis vinifera]
          Length = 876

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/112 (67%), Positives = 90/112 (80%)
 Frame = +2

Query: 2    FPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISSLFEISSNLQADDVSHIVEAQQAV 181
            FP RTVELV  LS+LCEGTWPAECVYNFLD+SVGISSL EI+S+   D++S I+E +  +
Sbjct: 741  FPIRTVELVGFLSALCEGTWPAECVYNFLDKSVGISSLLEITSDSLVDNISQIIETRVPL 800

Query: 182  QVPGIEGLFVPSGTRGRVLKVVGENTALVRWEYSPSGVFVLLLHLAQDMYFD 337
             VPG+EGL +PS TRG VLKV+  NTALVRWEY+ SGV VLLL LAQ +Y D
Sbjct: 801  HVPGVEGLIIPSQTRGHVLKVIDGNTALVRWEYTQSGVLVLLLRLAQRLYLD 852


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