BLASTX nr result

ID: Glycyrrhiza24_contig00030702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030702
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46278.1|CCNB2_MEDVA RecName: Full=G2/mitotic-specific cyclin...   106   2e-21
ref|XP_003629162.1| Cyclin [Medicago truncatula] gi|355523184|gb...   103   1e-20
ref|XP_003517139.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   102   2e-20
ref|XP_003537680.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   102   4e-20
emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]         99   3e-19

>sp|P46278.1|CCNB2_MEDVA RecName: Full=G2/mitotic-specific cyclin-2; AltName: Full=B-like
           cyclin; AltName: Full=CycMs2 gi|914863|emb|CAA57560.1|
           cycMs2 [Medicago sativa subsp. x varia]
          Length = 434

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
 Frame = -3

Query: 241 DQNNSNSIMPRNLQGG-------GARMFGQNRRTLTVINPNLVQGRPYPCVVNKRVLSDS 83
           ++NNSN++MPR  QGG       G R+ GQNRR L  IN N V GRPYPCVV+KRVL  S
Sbjct: 6   EENNSNAVMPRKFQGGMNQVGHGGGRIVGQNRRALGGINQNFVHGRPYPCVVHKRVL--S 63

Query: 82  EKNEIIEKKQADPVHRPITRRFAAHIA 2
           EK+EI EKKQAD  HRPITRRFAA IA
Sbjct: 64  EKHEICEKKQADLGHRPITRRFAAKIA 90


>ref|XP_003629162.1| Cyclin [Medicago truncatula] gi|355523184|gb|AET03638.1| Cyclin
           [Medicago truncatula]
          Length = 434

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/87 (64%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
 Frame = -3

Query: 241 DQNNSNSIMPRNLQGG-------GARMFGQNRRTLTVINPNLVQGRPYPCVVNKRVLSDS 83
           ++NNSN++MPR  QGG       G R+ GQNRR L  IN N V  RPYPCVV+KRVL  S
Sbjct: 6   EENNSNAVMPRKFQGGMNQVGRGGGRIVGQNRRALGGINQNFVHDRPYPCVVHKRVL--S 63

Query: 82  EKNEIIEKKQADPVHRPITRRFAAHIA 2
           EK+EI EKKQAD  HRPITRRFAA IA
Sbjct: 64  EKHEICEKKQADLGHRPITRRFAAQIA 90


>ref|XP_003517139.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 432

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 MAIPDQNNSNSIMPRNLQGG----GARMFGQNRRTLTVINPNLV-QGRPYPCVVNKRVLS 89
           M I D+N+S  I P + QGG    G R  GQNRR L+VIN +LV +GRPYPCVVNKR L+
Sbjct: 1   MKISDENSSKPINPTSFQGGIECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRALA 60

Query: 88  DSEKNEIIEKKQADPVHRPITRRFAAHIA 2
             EK+++ EKKQADP HRPITRRFAA IA
Sbjct: 61  --EKHDVCEKKQADPGHRPITRRFAAQIA 87


>ref|XP_003537680.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 433

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 MAIPDQNNSNSIMPRNLQGG----GARMFGQNRRTLTVINPNLV-QGRPYPCVVNKRVLS 89
           M I D+N+S  I P + QGG    G R  GQNRR L+VIN +LV +GRPYPCVVNKR L+
Sbjct: 1   MKISDENSSKPINPTSFQGGIECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRALA 60

Query: 88  DSEKNEIIEKKQADPVHRPITRRFAAHIA 2
             EK+ + EKKQADP HRPITRRFAA IA
Sbjct: 61  --EKHNVCEKKQADPGHRPITRRFAAQIA 87


>emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]
          Length = 428

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 QNNSNSIMPRNLQGG-GARMFGQNRRTLTVINPNLV-QGRPYPCVVNKRVLSDSEKNEII 65
           + N+ S  P N +GG  +R  GQNRR L VIN NLV +GRPYPCVVNKR LS  E+N++ 
Sbjct: 5   EENNVSNNPTNFEGGLDSRKVGQNRRALGVINQNLVVEGRPYPCVVNKRALS--ERNDVC 62

Query: 64  EKKQADPVHRPITRRFAAHIA 2
           EKKQADPVHRPITRRFAA IA
Sbjct: 63  EKKQADPVHRPITRRFAAKIA 83


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