BLASTX nr result

ID: Glycyrrhiza24_contig00030699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030699
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-li...   147   1e-33
ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-li...   143   2e-32
ref|XP_003608059.1| DNA polymerase I [Medicago truncatula] gi|35...   135   4e-30
ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [S...   127   7e-28
gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indi...   127   9e-28

>ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 436

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/81 (88%), Positives = 79/81 (97%)
 Frame = +3

Query: 3   IAPRGDQVVSFGVEDFTKRYGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVNAVQLISRF 182
           IAPRGDQ+VSFGVEDF +RYGGLKPSQF DMIAL+GDRSDNIPGV+GIGDV+AVQLISRF
Sbjct: 278 IAPRGDQMVSFGVEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLISRF 337

Query: 183 GTLERLLESVDQIKEDRIRKA 245
           GTLERLL+SVDQIKEDRI+KA
Sbjct: 338 GTLERLLDSVDQIKEDRIKKA 358


>ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 444

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/81 (85%), Positives = 78/81 (96%)
 Frame = +3

Query: 3   IAPRGDQVVSFGVEDFTKRYGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVNAVQLISRF 182
           IAPRGD++VSFGVEDF +RYGGLKPSQF DMIAL+GDRSDNIPGV+GIGDV+AVQL+SRF
Sbjct: 286 IAPRGDEMVSFGVEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLLSRF 345

Query: 183 GTLERLLESVDQIKEDRIRKA 245
           GTLERLL+SVDQIKED I+KA
Sbjct: 346 GTLERLLDSVDQIKEDHIKKA 366


>ref|XP_003608059.1| DNA polymerase I [Medicago truncatula] gi|355509114|gb|AES90256.1|
           DNA polymerase I [Medicago truncatula]
          Length = 491

 Score =  135 bits (339), Expect = 4e-30
 Identities = 73/104 (70%), Positives = 78/104 (75%), Gaps = 23/104 (22%)
 Frame = +3

Query: 3   IAPRGDQVVSFGVEDFTKRYGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVNAVQLISRF 182
           +APRGDQ+VSFG EDF +R+GGLKPSQFVDMIALSGDRSDNIPGVNGIGDV AVQLIS+F
Sbjct: 310 LAPRGDQMVSFGAEDFAERFGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVYAVQLISKF 369

Query: 183 -----------------------GTLERLLESVDQIKEDRIRKA 245
                                  GTLERLLESVDQIKEDRIRKA
Sbjct: 370 GEVLHCIFCMSVGNPAPSGRRGVGTLERLLESVDQIKEDRIRKA 413


>ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
           gi|241919454|gb|EER92598.1| hypothetical protein
           SORBIDRAFT_01g041870 [Sorghum bicolor]
          Length = 421

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/81 (71%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   IAPRGDQVVSFGVEDFTKRYGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVNAVQLISRF 182
           IAPRG  +VSFGVEDF KRYG LKPSQFVD++ALSGD++DNIPGV GIGD+NAV+LI++F
Sbjct: 265 IAPRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKF 324

Query: 183 GTLERLLESVDQIKEDRIRKA 245
           G+LE LL+SVD++++DRI++A
Sbjct: 325 GSLENLLKSVDEVEDDRIKQA 345


>gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indica Group]
          Length = 421

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/81 (71%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   IAPRGDQVVSFGVEDFTKRYGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVNAVQLISRF 182
           IAPRG  +VSFGVEDF KRYG LKPSQFVD++ALSGD++DNIPGV GIGD+NAV+LI++F
Sbjct: 264 IAPRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKF 323

Query: 183 GTLERLLESVDQIKEDRIRKA 245
           G+LE LL+SVD+++E+RI++A
Sbjct: 324 GSLENLLKSVDEVEEERIKQA 344


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