BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030681
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ...   170   1e-40
ref|XP_003615469.1| Pentatricopeptide repeat-containing protein ...   152   2e-35
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   149   3e-34
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33

>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  176 bits (445), Expect = 2e-42
 Identities = 84/93 (90%), Positives = 88/93 (94%)
 Frame = +1

Query: 1   RRLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRL 180
           RRLSV+YSRSTFSVLFRACSCLCSF+QGQLLHAHL KTPFQ NVYVGTALVDFYSKCG L
Sbjct: 429 RRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHL 488

Query: 181 ADAQRAFTSIFSPNVAAWTALINGYACHGLGSE 279
           A+AQR+F SIFSPNVAAWTALINGYA HGLGSE
Sbjct: 489 AEAQRSFISIFSPNVAAWTALINGYAYHGLGSE 521


>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509106|gb|AES90248.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/93 (88%), Positives = 85/93 (91%)
 Frame = +1

Query: 1   RRLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRL 180
           RR  VEYSRSTFSVLFRAC+ LCSFQQGQLLHAHL KTP+Q NVYVGTALVDFYSKCG L
Sbjct: 425 RRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHL 484

Query: 181 ADAQRAFTSIFSPNVAAWTALINGYACHGLGSE 279
           ADAQR+FTSIFSPNVAAWTALINGYA HG GSE
Sbjct: 485 ADAQRSFTSIFSPNVAAWTALINGYAYHGCGSE 517


>ref|XP_003615469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355516804|gb|AES98427.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 404

 Score =  152 bits (385), Expect = 2e-35
 Identities = 76/90 (84%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   RRLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRL 180
           RR SVEY RSTFSVL   C+ LCSFQQGQLLHAHL KTP+Q NVYVGTALVDFYSKCG L
Sbjct: 186 RRYSVEYRRSTFSVLSGGCAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHL 245

Query: 181 ADAQRAFTSIFSPNV-AAWTALINGYACHG 267
           ADAQR+FTSIFSPNV AAWTALINGYA HG
Sbjct: 246 ADAQRSFTSIFSPNVAAAWTALINGYAYHG 275


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/92 (75%), Positives = 80/92 (86%)
 Frame = +1

Query: 4   RLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRLA 183
           RLS++ +RSTFS LF ACSCL S QQGQLLHAHL KTPF++NVYVGT+L+D YSKCG + 
Sbjct: 460 RLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIM 519

Query: 184 DAQRAFTSIFSPNVAAWTALINGYACHGLGSE 279
           +AQ +F SIFSPNVAAWTALING+A HGLGSE
Sbjct: 520 EAQTSFVSIFSPNVAAWTALINGHAYHGLGSE 551



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = +1

Query: 4   RLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRLA 183
           R  ++ S STFS +   C+ L   + G+L+H  + K+  ++   VG+AL+ FY+ C  + 
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 190

Query: 184 DAQRAFTSIFSPNVAAWTALINGY 255
           +A+R F  +   N   W+ ++ GY
Sbjct: 191 EARRVFDVLVRRNEVLWSLMLVGY 214


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = +1

Query: 4   RLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRLA 183
           RLS++ ++STFS LF ACSCL S  QGQLLHAHL KTPF++NVYVGT+L+D YSKCG + 
Sbjct: 420 RLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIM 479

Query: 184 DAQRAFTSIFSPNVAAWTALINGYACHGLGSE 279
           +AQ +F SIFSPNVAAWTALING+A HGLGSE
Sbjct: 480 EAQTSFVSIFSPNVAAWTALINGHAYHGLGSE 511



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = +1

Query: 4   RLSVEYSRSTFSVLFRACSCLCSFQQGQLLHAHLTKTPFQANVYVGTALVDFYSKCGRLA 183
           R  ++ S STFS +   C+ L   + G+L+H  + K+  ++   VG+AL+ FY+ C  + 
Sbjct: 91  RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 150

Query: 184 DAQRAFTSIFSPNVAAWTALINGY 255
           +A+R F  +   N   W+ ++ GY
Sbjct: 151 EARRVFDVLVRRNEVLWSLMLVGY 174