BLASTX nr result

ID: Glycyrrhiza24_contig00030679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030679
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...    96   3e-18
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]    94   2e-17
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...    92   3e-17
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...    68   7e-10

>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/93 (51%), Positives = 63/93 (67%)
 Frame = +1

Query: 1   PNVVFYWALQPGRNNFMDTDLVEAEFRKIIGNGYEGTPGRMELSTLLASQLPKNAQFDDG 180
           PNVVFYW L   R NF+  + VE +F + I  GY G  G+MELS + AS+LPKNA+FD G
Sbjct: 377 PNVVFYWGLNRSRCNFVYIEPVEEDFSRSIYCGYYGIRGKMELSIVQASELPKNARFDSG 436

Query: 181 AVKGRKTCWKIIDYDKKRSQVYSQQHLPHCLIG 279
             K  K CWK++DY+++R+  YS QHLP   +G
Sbjct: 437 NGKKMKACWKMLDYNQRRTPAYS-QHLPSYFVG 468


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1   PNVVFYWALQPGRNNFMDTDLVEAEFRKIIGNG-YEGTPGRMELSTLLASQLPKNAQFDD 177
           PNVVF+W +QPGR NF D D+VE +F + I NG Y+G PG+M LS +  SQLP  AQ D 
Sbjct: 456 PNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAQLDT 515

Query: 178 GAVKGRKTCWKIIDYDKKRSQVYSQQHLPHCLIG 279
           G+    K CW++ +Y + R  V+S QHLP   +G
Sbjct: 516 GSRNRTKACWRMFNYHQPRVPVFS-QHLPLYFVG 548


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1   PNVVFYWALQPGRNNFMDTDLVEAEFRKIIGNG-YEGTPGRMELSTLLASQLPKNAQFDD 177
           PNVVF+W +QPGR NF D D+VE +F + I NG Y+G PG+M LS +  SQLP  A  D 
Sbjct: 497 PNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDT 556

Query: 178 GAVKGRKTCWKIIDYDKKRSQVYSQQHLPHCLIG 279
           G+    K CW++ +Y + R  V+S QHLP   +G
Sbjct: 557 GSRNRTKACWRMFNYHQPRVPVFS-QHLPLYFVG 589


>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 492

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 64/93 (68%)
 Frame = +1

Query: 1   PNVVFYWALQPGRNNFMDTDLVEAEFRKIIGNGYEGTPGRMELSTLLASQLPKNAQFDDG 180
           PNVVFYW L P R+N++D + VE +F + I +GY GT  ++ELS + A++LPKNAQF+ G
Sbjct: 387 PNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGYHGTRRKLELSIVKAAELPKNAQFNSG 446

Query: 181 AVKGRKTCWKIIDYDKKRSQVYSQQHLPHCLIG 279
             K  K  WK++D  ++R+  YS QHLP   +G
Sbjct: 447 NGKKMKAYWKVVD-KEQRTPAYS-QHLPGYFVG 477


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
           adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +1

Query: 1   PNVVFYWALQPGRNNFMDTDLVEAEFRKIIGNG-YEGTPGRMELSTLLASQLPKNAQ--F 171
           PN+VFYW LQ    N  D + VE EF K + +G ++G  GR++LS +  SQLPKN +   
Sbjct: 398 PNIVFYWGLQLRTINVSDIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECAS 457

Query: 172 DDGAVKGRKTCWKIIDYDKKRSQVYSQQHLPHCLIG 279
           ++ + K  KTCW+I +  +  +      HLP  ++G
Sbjct: 458 NNRSKKVTKTCWRIRENKQCNNVPVYSHHLPGYVVG 493


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