BLASTX nr result

ID: Glycyrrhiza24_contig00030678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030678
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   283   1e-74
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   281   5e-74
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   253   1e-65
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...   194   9e-48
ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46

>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine
           max]
          Length = 1052

 Score =  283 bits (724), Expect = 1e-74
 Identities = 134/172 (77%), Positives = 145/172 (84%)
 Frame = +3

Query: 27  VAKETNPCPHLVKGVNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXXXXXXXXSTSL 206
           VAKETN CPHLVKGVN +RLS KI SSG+VRCEDCRE A DRR               SL
Sbjct: 112 VAKETNSCPHLVKGVNFDRLSTKIGSSGSVRCEDCREGANDRRSGKGKGKHEKKKGGASL 171

Query: 207 DSKSESKAIWVCLECGQYTCGGVGLPVTPHCHVVGHARKSRHPLVVHFEKPQLCWCFPCN 386
           DSKSESK+IWVCLECG+YTCGGVGLP+TPHCHVVGHARK+RHPLVVHF+KPQLCWCFPCN
Sbjct: 172 DSKSESKSIWVCLECGRYTCGGVGLPITPHCHVVGHARKNRHPLVVHFDKPQLCWCFPCN 231

Query: 387 MLIQVDKIEKTDETSHLISDVVKLLKGRSSEKSSVDIEDVSCRDGSVTSEIK 542
           ML+QVDK EKTDE+ HL+SDVVKLLKGRS EKSSVDIEDVS  D S+TSEIK
Sbjct: 232 MLVQVDKFEKTDESCHLLSDVVKLLKGRSQEKSSVDIEDVSVGDDSITSEIK 283


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine
           max]
          Length = 980

 Score =  281 bits (719), Expect = 5e-74
 Identities = 134/172 (77%), Positives = 146/172 (84%), Gaps = 1/172 (0%)
 Frame = +3

Query: 27  VAKETNPCPHLVKGVNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXXXXXXXXSTSL 206
           VAKETN CPHLVKGVN +RLS K+ SSG++RCEDCRE A +RR               SL
Sbjct: 40  VAKETNSCPHLVKGVNFDRLSTKVGSSGSIRCEDCREGATNRRSGKGKGKHGKKKGGASL 99

Query: 207 DSKSESKAIWVCLECGQYTCGGVGLPVTPHCHVVGHARKSRHPLVVHFEKPQLCWCFPCN 386
           DSKSESK+IWVCLECGQYTCGGVGLP+TPHCHVVGHARK+RHPLVVHF+KPQLCWCFPCN
Sbjct: 100 DSKSESKSIWVCLECGQYTCGGVGLPITPHCHVVGHARKNRHPLVVHFDKPQLCWCFPCN 159

Query: 387 MLIQVDKIEKTDETSHLISDVVKLLKGRSSEKSSVDIEDVSCRD-GSVTSEI 539
           MLIQVDKIEKTDE+ HL+SDVVKLLKGRS EKSSVDIEDVS  D GS+TSEI
Sbjct: 160 MLIQVDKIEKTDESGHLLSDVVKLLKGRSQEKSSVDIEDVSVGDGGSITSEI 211


>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 1070

 Score =  253 bits (647), Expect = 1e-65
 Identities = 126/180 (70%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
 Frame = +3

Query: 6   EKVGG-VSVAKETNPCPHLVKGVNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXXXX 182
           E VG  VSVAKETNPCPHLVKG+ L+ LSGK+ESS  +RCE CRE AADRR         
Sbjct: 37  ESVGEEVSVAKETNPCPHLVKGIQLDILSGKVESSAPIRCEGCREGAADRRGGKGKGKHG 96

Query: 183 XXXXSTSLDSKSESKAIWVCLECGQYTCGGVGLPVTPHCHVVGHARKSRHPLVVHFEKPQ 362
                   DSKS+SK+IWVCLECGQY CGGVGLP+TP+CH + H++K+RHPLVV+ EKPQ
Sbjct: 97  KKKGGA--DSKSDSKSIWVCLECGQYNCGGVGLPITPNCHAIVHSKKARHPLVVNIEKPQ 154

Query: 363 LCWCFPCNMLIQVDKIEKTDETSHLISDVVKLLKGRSSEKSSVDIEDVSCRDGSVTSEIK 542
           LCWCF CNMLIQVDK+E TDE SH+ISDVVKLLKGRSS K+ VD+EDVS  DGSVTSEIK
Sbjct: 155 LCWCFRCNMLIQVDKLE-TDEASHVISDVVKLLKGRSSGKTLVDVEDVSIGDGSVTSEIK 213


>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
           gi|223542682|gb|EEF44219.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1006

 Score =  194 bits (492), Expect = 9e-48
 Identities = 97/174 (55%), Positives = 116/174 (66%)
 Frame = +3

Query: 21  VSVAKETNPCPHLVKGVNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXXXXXXXXST 200
           V+V KE   C HL KG NLN L+ K+ SS  ++CEDCRE  ADRR             S 
Sbjct: 42  VAVVKERKQCVHLGKGFNLNNLTVKLGSSDPLKCEDCREGVADRRGAKGKGKHGKKKGS- 100

Query: 201 SLDSKSESKAIWVCLECGQYTCGGVGLPVTPHCHVVGHARKSRHPLVVHFEKPQLCWCFP 380
            +DSKSESKAIWVCLECG + CGGVGLP TP  HVV HAR++RHPL++ +E P L WCFP
Sbjct: 101 -VDSKSESKAIWVCLECGHFACGGVGLPTTPQSHVVRHARQTRHPLIIQWENPHLRWCFP 159

Query: 381 CNMLIQVDKIEKTDETSHLISDVVKLLKGRSSEKSSVDIEDVSCRDGSVTSEIK 542
           CN LI V+  E+  E    + DVV L+K RSS++S VD+EDV    GSV SEIK
Sbjct: 160 CNTLIPVEMTEENGEKKDALLDVVNLIKTRSSQRSLVDVEDVWFGGGSVASEIK 213


>ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|222847428|gb|EEE84975.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  188 bits (477), Expect = 5e-46
 Identities = 90/178 (50%), Positives = 114/178 (64%)
 Frame = +3

Query: 6   EKVGGVSVAKETNPCPHLVKGVNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXXXXX 185
           E V GV+V KE   CPH  KG + N+LS KI SS + RCEDCRE   DR+          
Sbjct: 36  EDVDGVTVVKERKLCPHFDKGFDANKLSEKISSSDSFRCEDCREAVGDRKGAKGKGKQVK 95

Query: 186 XXXSTSLDSKSESKAIWVCLECGQYTCGGVGLPVTPHCHVVGHARKSRHPLVVHFEKPQL 365
              S S+DSKSESKAIWVCLECG   CGG+GLP T   H V H++++RHPLV  +E PQL
Sbjct: 96  KKGSGSVDSKSESKAIWVCLECGHLACGGIGLPTTSQSHAVRHSKQNRHPLVFQWENPQL 155

Query: 366 CWCFPCNMLIQVDKIEKTDETSHLISDVVKLLKGRSSEKSSVDIEDVSCRDGSVTSEI 539
            WCFPCN LI  +K  +  E    + +VV ++K +SS++SS D+EDV    GS+ SE+
Sbjct: 156 RWCFPCNTLIPAEKTGENGEKKDAVFEVVNMIKAQSSKESSADVEDVWFGRGSIISEL 213


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