BLASTX nr result

ID: Glycyrrhiza24_contig00030672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030672
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_003599019.1| Pentatricopeptide repeat-containing protein ...    65   4e-09

>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = +3

Query: 111 KDVASCKSIHSYGVRRYNCGVGPNSLPAMYSKCGEEYLAHRIFDRTLVYNDISW 272
           +DV SCKSIH Y VRR   GV  NSL  MYSKCGE  LAH+IFD+  V +DISW
Sbjct: 243 EDVDSCKSIHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISW 296


>ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355488067|gb|AES69270.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 944

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = +3

Query: 114 DVASCKSIHSYGVRRYNCGVGPNSLPAMYSKCGEEYLAHRIFDRTLVYNDISW 272
           DV  CKSIH Y VRR  CGV  NSL  MY KCG+ + A R+FDR  V +D+SW
Sbjct: 215 DVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSW 267


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