BLASTX nr result

ID: Glycyrrhiza24_contig00030663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030663
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucum...   231   5e-59
ref|XP_003519932.1| PREDICTED: DNA polymerase lambda-like [Glyci...   229   1e-58
ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula] gi...   228   5e-58
ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|2...   227   7e-58
ref|XP_002534528.1| DNA polymerase lambda, putative [Ricinus com...   220   1e-55

>ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucumis sativus]
          Length = 521

 Score =  231 bits (589), Expect = 5e-59
 Identities = 106/118 (89%), Positives = 114/118 (96%)
 Frame = +2

Query: 2   IFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDVKVYPRDIYAFGLIAWTGNDVLNRRLR 181
           IFSTHSEEGTDSGVDTYFG CTYPGRELRHRID+KVYPRDIYAFGLIAWTGNDVLNRRLR
Sbjct: 404 IFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLR 463

Query: 182 LQAESKGFRLDDTGLFPATQGSGGKRGTKGSACLKFDTEKEMFDFLGFPWLEPHERNL 355
           L AESKGFRLDDTGL+P+TQGSGGKRG +G+A LKFDTEK++F+FLGFPWLEPHERNL
Sbjct: 464 LLAESKGFRLDDTGLYPSTQGSGGKRGARGTATLKFDTEKDVFEFLGFPWLEPHERNL 521


>ref|XP_003519932.1| PREDICTED: DNA polymerase lambda-like [Glycine max]
          Length = 534

 Score =  229 bits (585), Expect = 1e-58
 Identities = 108/118 (91%), Positives = 113/118 (95%)
 Frame = +2

Query: 2   IFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDVKVYPRDIYAFGLIAWTGNDVLNRRLR 181
           IFS+HSEE TDSGVDTYFGFCTYPGRELRHRID+KVYPRDIYAFGL+AWTGNDVLNRRLR
Sbjct: 417 IFSSHSEEATDSGVDTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLR 476

Query: 182 LQAESKGFRLDDTGLFPATQGSGGKRGTKGSACLKFDTEKEMFDFLGFPWLEPHERNL 355
           LQAESKGFRLDDTGLFPATQGSGGKRG KGSA LKF+TEKE+FDFL FP LEPHERNL
Sbjct: 477 LQAESKGFRLDDTGLFPATQGSGGKRGAKGSASLKFNTEKEIFDFLDFPCLEPHERNL 534


>ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula]
           gi|355515071|gb|AES96694.1| DNA polymerase beta
           [Medicago truncatula]
          Length = 531

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/118 (88%), Positives = 113/118 (95%)
 Frame = +2

Query: 2   IFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDVKVYPRDIYAFGLIAWTGNDVLNRRLR 181
           I+STHSEEGTDSGVDTYFGFCTYPGRELRHRID+KVYPR+IYAFGL+AWTGNDVLNRRLR
Sbjct: 414 IYSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDLKVYPREIYAFGLVAWTGNDVLNRRLR 473

Query: 182 LQAESKGFRLDDTGLFPATQGSGGKRGTKGSACLKFDTEKEMFDFLGFPWLEPHERNL 355
            QAESKGFRLDDTGLFPA QGSGGKRGTKG+A +K  TEKE+F+FLGFPWLEPHERNL
Sbjct: 474 QQAESKGFRLDDTGLFPAIQGSGGKRGTKGTANMKLYTEKEVFEFLGFPWLEPHERNL 531


>ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|222863765|gb|EEF00896.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  227 bits (579), Expect = 7e-58
 Identities = 105/118 (88%), Positives = 110/118 (93%)
 Frame = +2

Query: 2   IFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDVKVYPRDIYAFGLIAWTGNDVLNRRLR 181
           IFSTHSEEGTDSGVDTYFG CTYPGRELRHRID KVYPRDIYAFGL+AWTGNDVLNRRLR
Sbjct: 391 IFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLVAWTGNDVLNRRLR 450

Query: 182 LQAESKGFRLDDTGLFPATQGSGGKRGTKGSACLKFDTEKEMFDFLGFPWLEPHERNL 355
           L AESKG+RLDDTGLFPATQ SGGKRG + SA L+FD EKE+FDFLGFPWLEPHERNL
Sbjct: 451 LLAESKGYRLDDTGLFPATQASGGKRGARASASLRFDNEKEVFDFLGFPWLEPHERNL 508


>ref|XP_002534528.1| DNA polymerase lambda, putative [Ricinus communis]
           gi|223525109|gb|EEF27858.1| DNA polymerase lambda,
           putative [Ricinus communis]
          Length = 126

 Score =  220 bits (560), Expect = 1e-55
 Identities = 102/118 (86%), Positives = 108/118 (91%)
 Frame = +2

Query: 2   IFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDVKVYPRDIYAFGLIAWTGNDVLNRRLR 181
           +FS HSEEGTDSGVDTYFG CTYPGR LRHRID KVYPRDIYAFGLIAWTGNDVLNRRLR
Sbjct: 9   VFSIHSEEGTDSGVDTYFGLCTYPGRGLRHRIDFKVYPRDIYAFGLIAWTGNDVLNRRLR 68

Query: 182 LQAESKGFRLDDTGLFPATQGSGGKRGTKGSACLKFDTEKEMFDFLGFPWLEPHERNL 355
           L AESKGFRLDDTGLFPATQ S GKRG++ +A L+ DTEKE+FDFLGFPWLEPHERNL
Sbjct: 69  LLAESKGFRLDDTGLFPATQASAGKRGSRATASLRLDTEKEVFDFLGFPWLEPHERNL 126


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