BLASTX nr result

ID: Glycyrrhiza24_contig00030662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030662
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago ...   256   2e-66
ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat...   254   5e-66
ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat...   216   1e-54
emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]   216   1e-54
ref|XP_003516664.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   207   5e-52

>ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
           gi|355512648|gb|AES94271.1| hypothetical protein
           MTR_5g012660 [Medicago truncatula]
          Length = 519

 Score =  256 bits (653), Expect = 2e-66
 Identities = 123/157 (78%), Positives = 137/157 (87%)
 Frame = -3

Query: 473 RTHSFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTS 294
           + H F+ AH +FVEIPQPNVVSWNTLISG+VHAG F+KALS+FT LERS ICADAFSFTS
Sbjct: 53  KMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTS 112

Query: 293 AMAACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKD 114
           AM ACA LSLL+LGSSIHSK VKLGM   TVVANCLI MYGKCGSVE AVR+FS+I DKD
Sbjct: 113 AMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKD 172

Query: 113 IISWNSVIAASANNGNIGLAYRFLHLMPNPDTITYNG 3
           +ISWNSVIAA ANNGNIGL ++FL LMPNPD ++YNG
Sbjct: 173 VISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNG 209



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
 Frame = -3

Query: 455 DAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMAACA 276
           DA ++   +P PN  SWN++I+G V+     +AL +F  +   ++  D F+F+  +   A
Sbjct: 222 DAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIA 281

Query: 275 HLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKDIISWNS 96
            LS L  G  IH   +K G+    VV + LI MY KCG V  A  +F+ + +++++SWN+
Sbjct: 282 SLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNA 341

Query: 95  VIAASANNGNIGLAYRFLHLM-----PNPDTITY 9
           +I   A NG+   A     L+       PD IT+
Sbjct: 342 MIYGYARNGDSAQAISLFELLKMERDTKPDGITF 375


>ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Glycine max]
          Length = 585

 Score =  254 bits (649), Expect = 5e-66
 Identities = 119/157 (75%), Positives = 142/157 (90%)
 Frame = -3

Query: 473 RTHSFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTS 294
           RTHSFSDAH++FVEI +P+VV+WNTLISG+VH G FR ALS FT L+RSH+CADA SFTS
Sbjct: 113 RTHSFSDAHKLFVEIAEPSVVTWNTLISGYVHTGQFRNALSFFTLLDRSHVCADAVSFTS 172

Query: 293 AMAACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKD 114
           A++AC+ LSL +LGSSIH K+VK+GMA GTVVANCLI MYGKCGS+E AVR+FS+ I+KD
Sbjct: 173 ALSACSLLSLFKLGSSIHCKIVKVGMADGTVVANCLIVMYGKCGSLERAVRIFSQTIEKD 232

Query: 113 IISWNSVIAASANNGNIGLAYRFLHLMPNPDTITYNG 3
           +ISWNSVIAASANNG+I LAY+FLHLMPNPDT++YNG
Sbjct: 233 VISWNSVIAASANNGDIELAYKFLHLMPNPDTVSYNG 269



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
 Frame = -3

Query: 464 SFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMA 285
           +  DA QV   +P PN  SWN++I+G V+    R+AL +F  +   ++  D F+F+  + 
Sbjct: 279 NMDDAVQVLSSLPSPNSSSWNSVITGFVNRNRAREALDIFRKMHLRNVEMDEFTFSIILT 338

Query: 284 ACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEII-DKDII 108
             A LS L  G  IH   +K G+     V + LI MY KCG V++A  +F   + +K+++
Sbjct: 339 GIAGLSALTWGMLIHCCTIKCGLDASVFVGSALIDMYSKCGQVKNAESIFVHALPNKNLV 398

Query: 107 SWNSVIAASANNGNIGLAYRFLHLMPN--------PDTITY 9
           SWN++++  A NG+   + R +HL  +        PD IT+
Sbjct: 399 SWNAMLSGYARNGD---SVRVIHLFQSLKMEREIKPDGITF 436


>ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Vitis vinifera]
           gi|297744381|emb|CBI37355.3| unnamed protein product
           [Vitis vinifera]
          Length = 601

 Score =  216 bits (551), Expect = 1e-54
 Identities = 104/156 (66%), Positives = 122/156 (78%)
 Frame = -3

Query: 473 RTHSFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTS 294
           R  S  DAH VFVEIP+P+VVSWN+LISG+ HAG FR AL +F  LERS ICADAFSFT+
Sbjct: 126 RIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADAFSFTA 185

Query: 293 AMAACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKD 114
           A+A C HLSLLRLG SIHSK+VK G+    VVANCL+ MYGKCG V+ A+RVF  IIDKD
Sbjct: 186 ALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDSIIDKD 245

Query: 113 IISWNSVIAASANNGNIGLAYRFLHLMPNPDTITYN 6
           IISWN+VI+ASA N  +  A+ +L  MP PDTI+YN
Sbjct: 246 IISWNTVISASARNRKLEQAFSYLRQMPEPDTISYN 281



 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
 Frame = -3

Query: 464 SFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMA 285
           +  DA Q+   +P PN  SWN++I+G+V+  L  +AL  F+ ++   I  D F+F+S ++
Sbjct: 292 NIEDAIQILSSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILS 351

Query: 284 ACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKDIIS 105
             A L+ L+ G  IH   +K G+    VV + LI MY KCG V++A  +F  +  K++++
Sbjct: 352 GIAGLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVT 411

Query: 104 WNSVIAASANNGNIGLAYRFLHLMP-----NPDTITY 9
           WN++I+  A+NGN     +    +       PD IT+
Sbjct: 412 WNAMISGFAHNGNFTEVIKLFKQLKTERDLKPDGITF 448


>emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
          Length = 625

 Score =  216 bits (551), Expect = 1e-54
 Identities = 104/156 (66%), Positives = 122/156 (78%)
 Frame = -3

Query: 473 RTHSFSDAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTS 294
           R  S  DAH VFVEIP+P+VVSWN+LISG+ HAG FR AL +F  LERS ICADAFSFT+
Sbjct: 150 RIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADAFSFTA 209

Query: 293 AMAACAHLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKD 114
           A+A C HLSLLRLG SIHSK+VK G+    VVANCL+ MYGKCG V+ A+RVF  IIDKD
Sbjct: 210 ALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDSIIDKD 269

Query: 113 IISWNSVIAASANNGNIGLAYRFLHLMPNPDTITYN 6
           IISWN+VI+ASA N  +  A+ +L  MP PDTI+YN
Sbjct: 270 IISWNTVISASARNRKLEQAFSYLRQMPEPDTISYN 305



 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 5/154 (3%)
 Frame = -3

Query: 455 DAHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMAACA 276
           DA Q+   +P PN  SWN++I+G+V+  L  +AL  F+ ++   I  D F+F+S ++  A
Sbjct: 319 DAIQILSSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILSGIA 378

Query: 275 HLSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKDIISWNS 96
            L+ L+ G  IH   +K G+    VV + LI MY KCG V++A  +F  +  K++++WN+
Sbjct: 379 GLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVTWNA 438

Query: 95  VIAASANNGNIGLAYRFLHLMP-----NPDTITY 9
           +I+  A+NGN     +    +       PD IT+
Sbjct: 439 MISGFAHNGNFTEVIKLFKQLKTERDLKPDGITF 472


>ref|XP_003516664.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g47460-like [Glycine max]
          Length = 533

 Score =  207 bits (528), Expect = 5e-52
 Identities = 100/139 (71%), Positives = 120/139 (86%)
 Frame = -3

Query: 419 NVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMAACAHLSLLRLGSSIH 240
           N++  NTLISG+VHA  FR ALS FT L++S++CADA SFTSA++AC+ LS L+LGSSIH
Sbjct: 77  NLLGLNTLISGYVHASQFRNALSFFTRLDKSYVCADAVSFTSALSACSQLSXLQLGSSIH 136

Query: 239 SKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEIIDKDIISWNSVIAASANNGNIG 60
            K+VKLGM  GTVVANCLI MYGKCG VE AV+VFS+ I+KD+ISWNSVIAASANNG+I 
Sbjct: 137 CKIVKLGMDDGTVVANCLIDMYGKCGFVERAVQVFSQTIEKDVISWNSVIAASANNGHIE 196

Query: 59  LAYRFLHLMPNPDTITYNG 3
           LAY+FLHLMPN DT++YNG
Sbjct: 197 LAYKFLHLMPNTDTVSYNG 215



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
 Frame = -3

Query: 452 AHQVFVEIPQPNVVSWNTLISGHVHAGLFRKALSVFTCLERSHICADAFSFTSAMAACAH 273
           A QV   +P PN  SWN++I+G +     R+AL +F  +    +  D F+F+  +   A 
Sbjct: 229 AVQVLSSLPSPNSSSWNSVITGFLDTNRAREALDMFRKMHLRKVEMDEFTFSIILNGIAC 288

Query: 272 LSLLRLGSSIHSKVVKLGMAGGTVVANCLIHMYGKCGSVEHAVRVFSEII-DKDIISWNS 96
           LS L  G  IH   +K G+    VV + LI MY KCG V++A  +F   + +K+++SWN+
Sbjct: 289 LSALTWGMLIHCCTIKCGLDASVVVGSALIDMYSKCGQVKNAESIFLHALPNKNLVSWNA 348

Query: 95  VIAASANNGNIGLAYRFLHLMP-----NPDTITY 9
           +++  A NG+         L+       PD IT+
Sbjct: 349 IMSGYARNGDSAGVIHLFKLLKMERDVKPDCITF 382


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