BLASTX nr result

ID: Glycyrrhiza24_contig00030635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030635
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   172   3e-41
ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   169   3e-40
ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPas...   147   7e-34
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   132   2e-29
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   132   2e-29

>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/113 (77%), Positives = 97/113 (85%)
 Frame = -2

Query: 341 FEMEAKNKEKNEDPAVDSPTSVLEDEDACGKEAEVKSEEEVLADVKDDGSSLVSKSMAEE 162
           FEMEAK+K KNED A +SPTSVLEDED C  + EVK EE V ADVKDDGSSL+SK+M EE
Sbjct: 186 FEMEAKDKVKNEDSAAESPTSVLEDEDVCALKEEVKLEEMVTADVKDDGSSLISKTMVEE 245

Query: 161 EEKLLKARMNEDEAQCEEAPDLNDAQFNKLDELLTQTKLYSEFLLEKMDDITL 3
           EEKLL+AR+ E+E Q EEA DLND QFNKLDELLTQT+LYSEFLLEKMDDITL
Sbjct: 246 EEKLLEARIKEEEVQYEEAVDLNDIQFNKLDELLTQTRLYSEFLLEKMDDITL 298


>ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 757

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/111 (74%), Positives = 93/111 (83%)
 Frame = -2

Query: 335 MEAKNKEKNEDPAVDSPTSVLEDEDACGKEAEVKSEEEVLADVKDDGSSLVSKSMAEEEE 156
           MEAKNK K +D   +SPTSVLEDE  C  + EVK EEEV AD+KDDG+SL+SK+M EEEE
Sbjct: 1   MEAKNKVKIDDSTAESPTSVLEDEAVCAPKEEVKLEEEVTADIKDDGTSLISKTMVEEEE 60

Query: 155 KLLKARMNEDEAQCEEAPDLNDAQFNKLDELLTQTKLYSEFLLEKMDDITL 3
            L++ARM E+E QCEE PDLND QFNKLDELLTQTKLYSEFLLEKMDDITL
Sbjct: 61  NLIEARMKEEEVQCEEVPDLNDTQFNKLDELLTQTKLYSEFLLEKMDDITL 111


>ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
           gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin
           remodeling ATPase [Medicago truncatula]
          Length = 750

 Score =  147 bits (372), Expect = 7e-34
 Identities = 79/111 (71%), Positives = 91/111 (81%)
 Frame = -2

Query: 335 MEAKNKEKNEDPAVDSPTSVLEDEDACGKEAEVKSEEEVLADVKDDGSSLVSKSMAEEEE 156
           M+ KN  KN+DP  +SPTSVLE+E     E EVKSEEEV+AD   DGSSLV K+MAEEEE
Sbjct: 1   MDPKNNVKNDDPPAESPTSVLEEE-----EVEVKSEEEVIAD---DGSSLVPKTMAEEEE 52

Query: 155 KLLKARMNEDEAQCEEAPDLNDAQFNKLDELLTQTKLYSEFLLEKMDDITL 3
           KLLK R+ E+E + E AP+LND+QFNKLDELLTQTKLYSEFLLEKMDDIT+
Sbjct: 53  KLLKVRVKEEEEKIEVAPNLNDSQFNKLDELLTQTKLYSEFLLEKMDDITM 103


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  132 bits (333), Expect = 2e-29
 Identities = 71/124 (57%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
 Frame = -2

Query: 365 ASLFSLPGFEMEAKNKEKNEDPAVDSPTSVLEDEDACGKEAEVKSEEEVLADVKDDGSSL 186
           +SL+ L G +M  + K + ++ A +SPTSVLEDED C  E E+K EEE++ + K+  SSL
Sbjct: 62  SSLYLLSGLKMAVEEKPRADNSA-ESPTSVLEDEDLCNGEKEIKLEEEIILEAKNGDSSL 120

Query: 185 VSKSMAEEEEKLLKARMNEDEAQ----CEEAPDLNDAQFNKLDELLTQTKLYSEFLLEKM 18
           +SK MAEEE+KLL+AR+ E+EA+      E+  L+D QF KLDELLTQT+LYSEFLLEKM
Sbjct: 121 ISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDNQFTKLDELLTQTQLYSEFLLEKM 180

Query: 17  DDIT 6
           DDIT
Sbjct: 181 DDIT 184


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  132 bits (333), Expect = 2e-29
 Identities = 71/124 (57%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
 Frame = -2

Query: 365 ASLFSLPGFEMEAKNKEKNEDPAVDSPTSVLEDEDACGKEAEVKSEEEVLADVKDDGSSL 186
           +SL+ L G +M  + K + ++ A +SPTSVLEDED C  E E+K EEE++ + K+  SSL
Sbjct: 56  SSLYLLSGLKMAVEEKPRADNSA-ESPTSVLEDEDLCNGEKEIKLEEEIILEAKNGDSSL 114

Query: 185 VSKSMAEEEEKLLKARMNEDEAQ----CEEAPDLNDAQFNKLDELLTQTKLYSEFLLEKM 18
           +SK MAEEE+KLL+AR+ E+EA+      E+  L+D QF KLDELLTQT+LYSEFLLEKM
Sbjct: 115 ISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDNQFTKLDELLTQTQLYSEFLLEKM 174

Query: 17  DDIT 6
           DDIT
Sbjct: 175 DDIT 178


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