BLASTX nr result

ID: Glycyrrhiza24_contig00030630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030630
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Gl...   100   9e-20

>ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  100 bits (250), Expect = 9e-20
 Identities = 80/194 (41%), Positives = 94/194 (48%), Gaps = 57/194 (29%)
 Frame = -2

Query: 413  GVHVCKQEANMKDILFEEPEL------------IWLQT--VKKAESIED--------DNC 300
            GVHV KQE NMKDILF +P+             I L T   +  +SIED        DNC
Sbjct: 1026 GVHVIKQETNMKDILFADPDPDLDSSLHSEKIDIDLDTDGEESTKSIEDSQYCNLVDDNC 1085

Query: 299  Y-NFENLEGCETPDGQVEKWWKTSKQEENSVDAYHTDM----DKILLHPKTL-------- 159
            Y NFE      TPD Q+E+WW  SK+ EN+    HT+M    DK LL  KTL        
Sbjct: 1086 YINFE------TPDRQMEEWWNISKEAENNRVVCHTEMDQNQDKNLLPEKTLYSVTEDSL 1139

Query: 158  --------DSVKAGECGSNIVVAADHPAKAQPKSQVTSFMQTPSASTP------------ 39
                     SVKA    S+I+V  DHP K QP+SQVT F+QTP+   P            
Sbjct: 1140 FSLYLEDIGSVKASGSNSSILV-VDHPVKNQPQSQVTGFIQTPNVQEPRTTVSMDHKVTR 1198

Query: 38   --LPQNTNSIMVLP 3
               PQ TNS M LP
Sbjct: 1199 GESPQKTNSTMELP 1212


Top