BLASTX nr result

ID: Glycyrrhiza24_contig00030625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030625
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24

>ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Glycine max]
          Length = 667

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/91 (74%), Positives = 77/91 (84%)
 Frame = -3

Query: 274 ERDEVSYGSIISGYMVYGFVEKALDVFRGMGNPGLSTWNAVISGMVQNNRFEGVLDLVRE 95
           E+DEV+YG+IISGYM YG V+ A+ VFRG+ NPGL+ WNAVISGMVQN +FEGV DLVR+
Sbjct: 304 EKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGVFDLVRQ 363

Query: 94  MMLGYGLKPNAVTLASILPLFSQFSNLRGGK 2
           M  G GL PNAVTLASILP FS FSNLRGGK
Sbjct: 364 MQ-GSGLSPNAVTLASILPSFSYFSNLRGGK 393


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/92 (69%), Positives = 79/92 (85%)
 Frame = -3

Query: 277 SERDEVSYGSIISGYMVYGFVEKALDVFRGMGNPGLSTWNAVISGMVQNNRFEGVLDLVR 98
           S +DEV+YGSI+SGYM +GFV+KA+D+FR M NP LSTWNAVISG+VQNN  EG+L+LV+
Sbjct: 303 SNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQ 362

Query: 97  EMMLGYGLKPNAVTLASILPLFSQFSNLRGGK 2
           EM   +G +PNAVTL+SILP FS FSNL+GGK
Sbjct: 363 EMQ-EFGFRPNAVTLSSILPTFSCFSNLKGGK 393


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/92 (67%), Positives = 77/92 (83%)
 Frame = -3

Query: 277 SERDEVSYGSIISGYMVYGFVEKALDVFRGMGNPGLSTWNAVISGMVQNNRFEGVLDLVR 98
           SE+DEV+YG+IISGYM +G V+K +++FR M +  LSTWNAVISG+VQNNR EGV+DLVR
Sbjct: 288 SEKDEVTYGAIISGYMAHGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVR 347

Query: 97  EMMLGYGLKPNAVTLASILPLFSQFSNLRGGK 2
           EM  G G +PNAVTL+S+LP  S FSNL+GGK
Sbjct: 348 EMQ-GLGFRPNAVTLSSVLPTLSYFSNLKGGK 378


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/92 (63%), Positives = 77/92 (83%)
 Frame = -3

Query: 277 SERDEVSYGSIISGYMVYGFVEKALDVFRGMGNPGLSTWNAVISGMVQNNRFEGVLDLVR 98
           SE+DEV+YG+IISG M++G+V+++L++FRGM    LSTWNAVI+G+VQNNR EGVLDLVR
Sbjct: 290 SEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVR 349

Query: 97  EMMLGYGLKPNAVTLASILPLFSQFSNLRGGK 2
           EM    G +PNAVTL+S+L   + FS+L+GGK
Sbjct: 350 EMQ-ALGFRPNAVTLSSVLSTIAYFSSLKGGK 380


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/91 (61%), Positives = 71/91 (78%)
 Frame = -3

Query: 274 ERDEVSYGSIISGYMVYGFVEKALDVFRGMGNPGLSTWNAVISGMVQNNRFEGVLDLVRE 95
           E+D ++Y S+ISGYMV+GFV +A+D+FR    P L TWNAVISG+VQNNR EG +D+ R 
Sbjct: 273 EKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRA 332

Query: 94  MMLGYGLKPNAVTLASILPLFSQFSNLRGGK 2
           M   +G +PN VTLASILP+FS FS L+GGK
Sbjct: 333 MQ-SHGCRPNTVTLASILPVFSHFSTLKGGK 362


Top