BLASTX nr result

ID: Glycyrrhiza24_contig00030620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030620
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819...   148   5e-34
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...   146   2e-33
emb|CBI14898.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medica...   142   2e-32
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...   140   1e-31

>ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819111 [Glycine max]
          Length = 952

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/82 (87%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   RSLSMKFRPKSFGDLVGQDVVVRSLLGAISRGRVASLYLFHGPRGTGKTSTSRIFAAALN 181
           RSLSMKFRPKSF DLVGQ+VVVRSLLGAISRGR+ S YLF+GPRGTGKTS SR+FAAALN
Sbjct: 298 RSLSMKFRPKSFSDLVGQNVVVRSLLGAISRGRITSFYLFYGPRGTGKTSASRMFAAALN 357

Query: 182 CLSVGEQRPCGLCRECVLFFSG 247
           CLSV EQRPCGLCRECVL FSG
Sbjct: 358 CLSVVEQRPCGLCRECVLLFSG 379


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +2

Query: 2   RSLSMKFRPKSFGDLVGQDVVVRSLLGAISRGRVASLYLFHGPRGTGKTSTSRIFAAALN 181
           RSLSMKFRPKSF DLVGQ+VVVRSLL AISRGR+ S YLF+GPRGTGKTSTSR+FAAALN
Sbjct: 298 RSLSMKFRPKSFSDLVGQNVVVRSLLAAISRGRITSFYLFYGPRGTGKTSTSRMFAAALN 357

Query: 182 CLSVGEQRPCGLCRECVLFFSG 247
           CLSV E+RPCGLCRECVL FSG
Sbjct: 358 CLSVVEKRPCGLCRECVLLFSG 379


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/82 (84%), Positives = 74/82 (90%)
 Frame = +2

Query: 2   RSLSMKFRPKSFGDLVGQDVVVRSLLGAISRGRVASLYLFHGPRGTGKTSTSRIFAAALN 181
           RSLS KFRPK+F +LVGQ+VV RSLLGAISRGR+ S YLFHGPRGTGKTS SRIFAAALN
Sbjct: 153 RSLSQKFRPKAFNELVGQNVVARSLLGAISRGRITSFYLFHGPRGTGKTSASRIFAAALN 212

Query: 182 CLSVGEQRPCGLCRECVLFFSG 247
           CLS+ E RPCGLCRECVLFFSG
Sbjct: 213 CLSLEEHRPCGLCRECVLFFSG 234


>ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355509967|gb|AES91109.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 936

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/82 (82%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   RSLSMKFRPKSFGDLVGQDVVVRSLLGAISRGRVASLYLFHGPRGTGKTSTSRIFAAALN 181
           RSLSMKFRPKSF DLVGQ++V +SL GAISRGR+AS YLFHGPRGTGKTS SRIFAAALN
Sbjct: 278 RSLSMKFRPKSFNDLVGQNMVGKSLSGAISRGRIASFYLFHGPRGTGKTSASRIFAAALN 337

Query: 182 CLSVGEQRPCGLCRECVLFFSG 247
           C+S+ E+RPCGLC ECVLFFSG
Sbjct: 338 CISLEERRPCGLCSECVLFFSG 359


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/82 (80%), Positives = 74/82 (90%)
 Frame = +2

Query: 2   RSLSMKFRPKSFGDLVGQDVVVRSLLGAISRGRVASLYLFHGPRGTGKTSTSRIFAAALN 181
           RSLSMKFRPKSF DLVGQ+V+ +SLLGAIS GR++S Y+FHGPRGTGKTS SRIFAAA+N
Sbjct: 291 RSLSMKFRPKSFSDLVGQNVIGKSLLGAISTGRISSFYIFHGPRGTGKTSASRIFAAAMN 350

Query: 182 CLSVGEQRPCGLCRECVLFFSG 247
           CLS  EQ+PCGLCRECVLFF G
Sbjct: 351 CLSPLEQKPCGLCRECVLFFLG 372


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