BLASTX nr result

ID: Glycyrrhiza24_contig00030616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030616
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula] ...   293   1e-77
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   293   1e-77
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   285   5e-75
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   278   3e-73
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   278   3e-73

>ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 629

 Score =  293 bits (751), Expect = 1e-77
 Identities = 144/189 (76%), Positives = 154/189 (81%), Gaps = 1/189 (0%)
 Frame = +2

Query: 2   VEEEPATG-AGGVPLPVDVTRPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYEDVFK 178
           VEE P+   AGG P PVDV+RPNPNGMEFDN+YLDMNGIIHPCFHPDGKPAPATY+DVFK
Sbjct: 22  VEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPATYDDVFK 81

Query: 179 SIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXXXXXXXXXXXXXXXXXXXXXX 358
           S+FDYIDHLFSLVRPRK+LYLAIDGVAPRAKMNQQRS                       
Sbjct: 82  SMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRNEF 141

Query: 359 XXXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQTRLNYNPGWRNTKVILSDSN 538
                LL+SK+K ETHDSNVITPGTPFMAVLSVALQYY+QTRLNYNPGWRNTKV+LSDSN
Sbjct: 142 ADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYIQTRLNYNPGWRNTKVMLSDSN 201

Query: 539 VPGEGEHKI 565
           VPGEGEHKI
Sbjct: 202 VPGEGEHKI 210


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 956

 Score =  293 bits (751), Expect = 1e-77
 Identities = 144/189 (76%), Positives = 154/189 (81%), Gaps = 1/189 (0%)
 Frame = +2

Query: 2   VEEEPATG-AGGVPLPVDVTRPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYEDVFK 178
           VEE P+   AGG P PVDV+RPNPNGMEFDN+YLDMNGIIHPCFHPDGKPAPATY+DVFK
Sbjct: 22  VEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPATYDDVFK 81

Query: 179 SIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXXXXXXXXXXXXXXXXXXXXXX 358
           S+FDYIDHLFSLVRPRK+LYLAIDGVAPRAKMNQQRS                       
Sbjct: 82  SMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRNEF 141

Query: 359 XXXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQTRLNYNPGWRNTKVILSDSN 538
                LL+SK+K ETHDSNVITPGTPFMAVLSVALQYY+QTRLNYNPGWRNTKV+LSDSN
Sbjct: 142 ADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYIQTRLNYNPGWRNTKVMLSDSN 201

Query: 539 VPGEGEHKI 565
           VPGEGEHKI
Sbjct: 202 VPGEGEHKI 210


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  285 bits (728), Expect = 5e-75
 Identities = 135/188 (71%), Positives = 149/188 (79%)
 Frame = +2

Query: 2   VEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYEDVFKS 181
           VEE+PA G  GVP P+D ++PNPNGMEFDN+YLDMNGIIHPCFHPDGKPAPATY+DVFKS
Sbjct: 22  VEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPATYDDVFKS 81

Query: 182 IFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXXXXXXXXXXXXXXXXXXXXXXX 361
           IFDY+DHL++LVRPRK+LYLAIDGVAPRAKMNQQRS                        
Sbjct: 82  IFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFQ 141

Query: 362 XXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQTRLNYNPGWRNTKVILSDSNV 541
               +LSSKDKPET DSNVITPGT FM  LSV+LQYY+QTRLN+NP WRNTKVILSDSN 
Sbjct: 142 SEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQTRLNHNPSWRNTKVILSDSNA 201

Query: 542 PGEGEHKI 565
           PGEGEHKI
Sbjct: 202 PGEGEHKI 209


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  278 bits (712), Expect = 3e-73
 Identities = 141/193 (73%), Positives = 151/193 (78%), Gaps = 5/193 (2%)
 Frame = +2

Query: 2   VEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYEDVFKS 181
           VEE+P+ GA      VDV++PNP+GMEFDN+YLDMNGIIHPCFHPDGKPAPATYEDVFKS
Sbjct: 22  VEEDPSAGA------VDVSKPNPSGMEFDNLYLDMNGIIHPCFHPDGKPAPATYEDVFKS 75

Query: 182 IFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXXXXXXXXXXXXXXXXXXXXXXX 361
           IFDYIDH+FSLVRPRK+LYLAIDGVAPRAKMNQQRS                        
Sbjct: 76  IFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEKDAAEAEAEIERL 135

Query: 362 XXXX-----LLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQTRLNYNPGWRNTKVIL 526
                    LLSSKDKPET+DSNVITPGTPFM VLSVALQYY+QTRLNYNPGW NTKVIL
Sbjct: 136 REEFEGEMKLLSSKDKPETYDSNVITPGTPFMGVLSVALQYYIQTRLNYNPGWWNTKVIL 195

Query: 527 SDSNVPGEGEHKI 565
           SDSNVPGEGEHKI
Sbjct: 196 SDSNVPGEGEHKI 208


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  278 bits (712), Expect = 3e-73
 Identities = 141/193 (73%), Positives = 150/193 (77%), Gaps = 5/193 (2%)
 Frame = +2

Query: 2   VEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYEDVFKS 181
           VEEEP+ G+G V    DV++PNPNGMEFDN+YLDMNGIIHPCFHPDGK AP TYEDVFKS
Sbjct: 22  VEEEPSVGSGAV----DVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKSAPTTYEDVFKS 77

Query: 182 IFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXXXXXXXXXXXXXXXXXXXXXXX 361
           IFDYIDH+FSLVRPRK+LYLAIDGVAPRAKMNQQRS                        
Sbjct: 78  IFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEKDAAEAEAEIERL 137

Query: 362 XXXX-----LLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQTRLNYNPGWRNTKVIL 526
                    LLSSK KPET+DSNVITPGTPFM VLSVALQYY+QTRLNYNPGWRNTKVIL
Sbjct: 138 REEFEGEMKLLSSKVKPETYDSNVITPGTPFMGVLSVALQYYIQTRLNYNPGWRNTKVIL 197

Query: 527 SDSNVPGEGEHKI 565
           SDSNVPGEGEHKI
Sbjct: 198 SDSNVPGEGEHKI 210


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