BLASTX nr result

ID: Glycyrrhiza24_contig00030602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030602
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   172   3e-41
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   165   4e-39
emb|CBI21631.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   141   6e-32
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   130   1e-28

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/92 (86%), Positives = 88/92 (95%)
 Frame = +3

Query: 3    NKDRLFLYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLSIILTPVALKIYADIFSFLI 182
            +KDRLF+YMKGHGKLPLSASAIGVRSFDFLGLGYHV WPLSI+LTP ALK+YADIFSFLI
Sbjct: 912  HKDRLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVQWPLSIVLTPAALKVYADIFSFLI 971

Query: 183  QVKLAIFSLTDVWCSLKDMMHTPNKDLNSELH 278
            QVKLAIFSLTDVWCSLKD++HT NK+ NSE+H
Sbjct: 972  QVKLAIFSLTDVWCSLKDLVHTTNKNQNSEIH 1003


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = +3

Query: 3    NKDRLFLYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLSIILTPVALKIYADIFSFLI 182
            NK+RLF+YMKG GKLPLSASAIG+RSFDFLGLGYHVDWPL IILTP ALKIYADIFSFLI
Sbjct: 906  NKNRLFVYMKGRGKLPLSASAIGLRSFDFLGLGYHVDWPLCIILTPAALKIYADIFSFLI 965

Query: 183  QVKLAIFSLTDVWCSLKDMMHTPNKDLNSE 272
            QVKLA+FSLTDVWCSLKDM HT NK LN+E
Sbjct: 966  QVKLALFSLTDVWCSLKDMAHTTNKGLNAE 995


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/91 (73%), Positives = 76/91 (83%)
 Frame = +3

Query: 6    KDRLFLYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLSIILTPVALKIYADIFSFLIQ 185
            KD+LF+YMKGH   PLS  + GV SF FLGLGY VDWP+SIILTP ALKIYADIFSFLIQ
Sbjct: 779  KDKLFVYMKGHAMAPLSTFSTGVHSFSFLGLGYRVDWPISIILTPGALKIYADIFSFLIQ 838

Query: 186  VKLAIFSLTDVWCSLKDMMHTPNKDLNSELH 278
            VKLA FSLTDVWCSLKD+MH  +++ +S LH
Sbjct: 839  VKLAAFSLTDVWCSLKDLMHLVSQNRHSSLH 869


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/91 (73%), Positives = 76/91 (83%)
 Frame = +3

Query: 6    KDRLFLYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLSIILTPVALKIYADIFSFLIQ 185
            KD+LF+YMKGH   PLS  + GV SF FLGLGY VDWP+SIILTP ALKIYADIFSFLIQ
Sbjct: 975  KDKLFVYMKGHAMAPLSTFSTGVHSFSFLGLGYRVDWPISIILTPGALKIYADIFSFLIQ 1034

Query: 186  VKLAIFSLTDVWCSLKDMMHTPNKDLNSELH 278
            VKLA FSLTDVWCSLKD+MH  +++ +S LH
Sbjct: 1035 VKLAAFSLTDVWCSLKDLMHLVSQNRHSSLH 1065


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/77 (80%), Positives = 71/77 (92%)
 Frame = +3

Query: 3    NKDRLFLYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLSIILTPVALKIYADIFSFLI 182
            NKDRL++Y+KG+  +PL+ SAIGV SFDFLGLGYHVDWPLSIILTP ALKIY+DIFSFLI
Sbjct: 949  NKDRLYVYIKGNAVIPLATSAIGVHSFDFLGLGYHVDWPLSIILTPSALKIYSDIFSFLI 1008

Query: 183  QVKLAIFSLTDVWCSLK 233
            QVKLAIF+L+DVW SLK
Sbjct: 1009 QVKLAIFALSDVWRSLK 1025


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