BLASTX nr result

ID: Glycyrrhiza24_contig00030594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030594
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626892.1| NBS-containing resistance-like protein [Medi...   144   7e-33
ref|XP_003614284.1| TMV resistance protein N [Medicago truncatul...   140   8e-32
ref|XP_003621940.1| TMV resistance protein N [Medicago truncatul...   140   1e-31
gb|ABN09142.1| TIR [Medicago truncatula]                              140   1e-31
ref|XP_003626928.1| NBS-containing resistance-like protein [Medi...   138   5e-31

>ref|XP_003626892.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520914|gb|AET01368.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 908

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/101 (70%), Positives = 79/101 (78%)
 Frame = -2

Query: 308  EGLSHDVFPSLIWSWMSPTMNSLPHIPPFGGMSLSLVSLDVESHNLGLGYLSPMLNSLSK 129
            EGLS DVFPS+IWSWMSP MNSL HIPP GGMS+SLV LDV+S NLGL + SP+L+S SK
Sbjct: 770  EGLSRDVFPSIIWSWMSPNMNSLAHIPPVGGMSMSLVCLDVDSRNLGLVHQSPILSSYSK 829

Query: 128  LRGVQLQCHSEIQLTQELRRFLDGLCDANFNELETSHASQI 6
            LR V +QC SEIQL QE RRFLD + DA   E  TSH SQI
Sbjct: 830  LRSVSVQCDSEIQLKQEFRRFLDDIYDAGLTEFGTSHGSQI 870


>ref|XP_003614284.1| TMV resistance protein N [Medicago truncatula]
            gi|355515619|gb|AES97242.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1047

 Score =  140 bits (354), Expect = 8e-32
 Identities = 75/102 (73%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308  EGLSHDVFPSLIWSWMSPTMNSLPHIPPFGGMSLSLVSLDVESHNLGLGYLSPMLNSLSK 129
            EGLSHDVFPSLIWSWMSPT NSL H+ PF G SLSLVSLDVES+N  + Y SPM+  LSK
Sbjct: 750  EGLSHDVFPSLIWSWMSPTRNSLSHVFPFAGNSLSLVSLDVESNN--MDYQSPMVTVLSK 807

Query: 128  LRGVQLQCHSEIQLTQELRRFLDGLCDANFNELE-TSHASQI 6
            LR V  QCHSE QLTQELRRF+D L D NF ELE TSH  QI
Sbjct: 808  LRCVWFQCHSENQLTQELRRFIDDLYDVNFTELETTSHGHQI 849


>ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
            gi|355496955|gb|AES78158.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1093

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
 Frame = -2

Query: 308  EGLSHDVFPSLIWSWMSPTMNSLPHIPPFGGMSLSLVSLDVE----SHNLGLGYLSPMLN 141
            EGLSH+VFPSLI  WMSPT+NSLP IPPFGGM LSLVSLD+E    ++N  L  L P LN
Sbjct: 759  EGLSHEVFPSLIRFWMSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLN 818

Query: 140  SLSKLRGVQLQCHSEIQLTQELRRFLDGLCDANFNELETSHASQIS 3
            S S+LR  ++QC S IQLT+ELRRFLD L DANF ELETSH SQIS
Sbjct: 819  SFSELRSFRVQCQSMIQLTRELRRFLDDLYDANFTELETSHTSQIS 864


>gb|ABN09142.1| TIR [Medicago truncatula]
          Length = 1054

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
 Frame = -2

Query: 308  EGLSHDVFPSLIWSWMSPTMNSLPHIPPFGGMSLSLVSLDVE----SHNLGLGYLSPMLN 141
            EGLSH+VFPSLI  WMSPT+NSLP IPPFGGM LSLVSLD+E    ++N  L  L P LN
Sbjct: 759  EGLSHEVFPSLIRFWMSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLN 818

Query: 140  SLSKLRGVQLQCHSEIQLTQELRRFLDGLCDANFNELETSHASQIS 3
            S S+LR  ++QC S IQLT+ELRRFLD L DANF ELETSH SQIS
Sbjct: 819  SFSELRSFRVQCQSMIQLTRELRRFLDDLYDANFTELETSHTSQIS 864


>ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520950|gb|AET01404.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/102 (70%), Positives = 78/102 (76%)
 Frame = -2

Query: 308  EGLSHDVFPSLIWSWMSPTMNSLPHIPPFGGMSLSLVSLDVESHNLGLGYLSPMLNSLSK 129
            EGLSH VFPSLI SWMSPTMNS+ HI PFGGMS SL SLD+ES+NL L Y S +L+S SK
Sbjct: 743  EGLSHHVFPSLIRSWMSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSK 802

Query: 128  LRGVQLQCHSEIQLTQELRRFLDGLCDANFNELETSHASQIS 3
            LR V +QC SEIQL QE RRFLD L DA   EL  SHAS IS
Sbjct: 803  LRSVSVQCDSEIQLKQEFRRFLDDLYDAGLTELGISHASHIS 844


Top