BLASTX nr result

ID: Glycyrrhiza24_contig00030590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030590
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein A...   146   2e-33
ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein A...   137   7e-31
ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...   122   4e-26
ref|XP_002324229.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max]
          Length = 390

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/121 (64%), Positives = 87/121 (71%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182
           +FED E LRLLPKCKHAFHM+CIDKW E+HSTCPLCR RVEA DIKN   SLSSRFLRVP
Sbjct: 136 KFEDTETLRLLPKCKHAFHMNCIDKWFESHSTCPLCRRRVEAGDIKNLNFSLSSRFLRVP 195

Query: 183 SNLNEDPNLEIFIQREPSSHRGS---SRRKIKKEELLLDQEXXXXXXXXXXTEW-KPVHM 350
           SNL EDPNLEIF+ REP SH G       K KK+ELLL  +           +W KPVH+
Sbjct: 196 SNLTEDPNLEIFVHREP-SHGGRGFWDVGKCKKQELLLIDD---SSSIGGTRKWNKPVHV 251

Query: 351 I 353
           +
Sbjct: 252 M 252


>ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max]
          Length = 395

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
 Frame = +3

Query: 3   RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182
           +FED EILRLLPKCKH FHM+CIDKWLE+HS+CPLCR  ++ +DIKNFT S+SSR LRVP
Sbjct: 142 QFEDTEILRLLPKCKHTFHMNCIDKWLESHSSCPLCRNSIDPLDIKNFTYSISSRSLRVP 201

Query: 183 SNLNEDPNLEIFIQREPSSHRGSSRR-----KIKKEELLLDQE 296
           SNL ED NLEIF+ RE SS      R     +  KEE LLDQ+
Sbjct: 202 SNLTEDTNLEIFVHRESSSRFNMGSRFWNLGRNNKEERLLDQQ 244


>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/105 (56%), Positives = 77/105 (73%), Gaps = 10/105 (9%)
 Frame = +3

Query: 3   RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182
           +FED+++LRLLPKCKHAFH +CID+WL++HS+CPLCRY+++  D+K+FT S S R L+ P
Sbjct: 121 KFEDSDVLRLLPKCKHAFHENCIDQWLKSHSSCPLCRYKIDPKDVKSFTYSRSWRHLQNP 180

Query: 183 SNLNEDPNLEIFIQRE----------PSSHRGSSRRKIKKEELLL 287
           SNL EDPNLEIF++RE          P S    S    KKEELL+
Sbjct: 181 SNLAEDPNLEIFVEREHDRQVSSCFNPGSSFQISNDNSKKEELLV 225


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/97 (61%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
 Frame = +3

Query: 3   RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182
           RFED EILRLLPKCKHAFH +CID+WLE+HS+CPLCRY+ +  ++K+F  S S R+ + P
Sbjct: 124 RFEDIEILRLLPKCKHAFHKNCIDQWLESHSSCPLCRYKFDPNELKSFRYSNSLRYSQTP 183

Query: 183 SNLNEDPNLEIFIQREPSSHRGSSR---RKIKKEELL 284
           SNL +DPNLE+FI RE   ++GSS     K KKEELL
Sbjct: 184 SNLADDPNLELFIHRE-QDYQGSSTFNLGKGKKEELL 219


>ref|XP_002324229.1| predicted protein [Populus trichocarpa] gi|222865663|gb|EEF02794.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/82 (60%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182
           +FED+E+LRLLPKC HAFH +CID+WL +HS+CPLCRY+++ +D+K+F+ S S R+L+ P
Sbjct: 126 KFEDSEVLRLLPKCMHAFHKNCIDQWLTSHSSCPLCRYKLDPMDLKSFSCSKSWRYLQNP 185

Query: 183 SNLNEDPNLEIFIQREPSSHRG 248
           S+L EDPNLEIF++RE   H+G
Sbjct: 186 SDLTEDPNLEIFVERE-QDHQG 206


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