BLASTX nr result
ID: Glycyrrhiza24_contig00030590
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030590 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein A... 146 2e-33 ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein A... 137 7e-31 ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2... 124 1e-26 ref|XP_002516536.1| ring finger protein, putative [Ricinus commu... 122 4e-26 ref|XP_002324229.1| predicted protein [Populus trichocarpa] gi|2... 118 6e-25 >ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max] Length = 390 Score = 146 bits (368), Expect = 2e-33 Identities = 78/121 (64%), Positives = 87/121 (71%), Gaps = 4/121 (3%) Frame = +3 Query: 3 RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182 +FED E LRLLPKCKHAFHM+CIDKW E+HSTCPLCR RVEA DIKN SLSSRFLRVP Sbjct: 136 KFEDTETLRLLPKCKHAFHMNCIDKWFESHSTCPLCRRRVEAGDIKNLNFSLSSRFLRVP 195 Query: 183 SNLNEDPNLEIFIQREPSSHRGS---SRRKIKKEELLLDQEXXXXXXXXXXTEW-KPVHM 350 SNL EDPNLEIF+ REP SH G K KK+ELLL + +W KPVH+ Sbjct: 196 SNLTEDPNLEIFVHREP-SHGGRGFWDVGKCKKQELLLIDD---SSSIGGTRKWNKPVHV 251 Query: 351 I 353 + Sbjct: 252 M 252 >ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max] Length = 395 Score = 137 bits (346), Expect = 7e-31 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 5/103 (4%) Frame = +3 Query: 3 RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182 +FED EILRLLPKCKH FHM+CIDKWLE+HS+CPLCR ++ +DIKNFT S+SSR LRVP Sbjct: 142 QFEDTEILRLLPKCKHTFHMNCIDKWLESHSSCPLCRNSIDPLDIKNFTYSISSRSLRVP 201 Query: 183 SNLNEDPNLEIFIQREPSSHRGSSRR-----KIKKEELLLDQE 296 SNL ED NLEIF+ RE SS R + KEE LLDQ+ Sbjct: 202 SNLTEDTNLEIFVHRESSSRFNMGSRFWNLGRNNKEERLLDQQ 244 >ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1| predicted protein [Populus trichocarpa] Length = 412 Score = 124 bits (310), Expect = 1e-26 Identities = 59/105 (56%), Positives = 77/105 (73%), Gaps = 10/105 (9%) Frame = +3 Query: 3 RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182 +FED+++LRLLPKCKHAFH +CID+WL++HS+CPLCRY+++ D+K+FT S S R L+ P Sbjct: 121 KFEDSDVLRLLPKCKHAFHENCIDQWLKSHSSCPLCRYKIDPKDVKSFTYSRSWRHLQNP 180 Query: 183 SNLNEDPNLEIFIQRE----------PSSHRGSSRRKIKKEELLL 287 SNL EDPNLEIF++RE P S S KKEELL+ Sbjct: 181 SNLAEDPNLEIFVEREHDRQVSSCFNPGSSFQISNDNSKKEELLV 225 >ref|XP_002516536.1| ring finger protein, putative [Ricinus communis] gi|223544356|gb|EEF45877.1| ring finger protein, putative [Ricinus communis] Length = 407 Score = 122 bits (305), Expect = 4e-26 Identities = 60/97 (61%), Positives = 75/97 (77%), Gaps = 3/97 (3%) Frame = +3 Query: 3 RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182 RFED EILRLLPKCKHAFH +CID+WLE+HS+CPLCRY+ + ++K+F S S R+ + P Sbjct: 124 RFEDIEILRLLPKCKHAFHKNCIDQWLESHSSCPLCRYKFDPNELKSFRYSNSLRYSQTP 183 Query: 183 SNLNEDPNLEIFIQREPSSHRGSSR---RKIKKEELL 284 SNL +DPNLE+FI RE ++GSS K KKEELL Sbjct: 184 SNLADDPNLELFIHRE-QDYQGSSTFNLGKGKKEELL 219 >ref|XP_002324229.1| predicted protein [Populus trichocarpa] gi|222865663|gb|EEF02794.1| predicted protein [Populus trichocarpa] Length = 227 Score = 118 bits (295), Expect = 6e-25 Identities = 50/82 (60%), Positives = 70/82 (85%) Frame = +3 Query: 3 RFEDAEILRLLPKCKHAFHMSCIDKWLENHSTCPLCRYRVEAVDIKNFTLSLSSRFLRVP 182 +FED+E+LRLLPKC HAFH +CID+WL +HS+CPLCRY+++ +D+K+F+ S S R+L+ P Sbjct: 126 KFEDSEVLRLLPKCMHAFHKNCIDQWLTSHSSCPLCRYKLDPMDLKSFSCSKSWRYLQNP 185 Query: 183 SNLNEDPNLEIFIQREPSSHRG 248 S+L EDPNLEIF++RE H+G Sbjct: 186 SDLTEDPNLEIFVERE-QDHQG 206