BLASTX nr result

ID: Glycyrrhiza24_contig00030586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030586
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago ...   215   4e-54
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...   215   5e-54
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]     89   4e-16
emb|CBI27227.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus commun...    84   1e-14

>ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago truncatula]
           gi|355504239|gb|AES85442.1| hypothetical protein
           MTR_126s0013 [Medicago truncatula]
          Length = 201

 Score =  215 bits (548), Expect = 4e-54
 Identities = 115/171 (67%), Positives = 126/171 (73%)
 Frame = +3

Query: 60  RMAQSESRRDLPAKEPRLVSNTSSLKVFXXXXXXXXXPQGNCSIIKFFDNYHSSQSSFEQ 239
           RMAQ++  RDLPAKE +L SNTSSLK           PQGNCSI KFF+N   SQSSFEQ
Sbjct: 46  RMAQNKPYRDLPAKESKLASNTSSLKAVEKKNAAGKKPQGNCSITKFFNN---SQSSFEQ 102

Query: 240 KNVTSAQGVKMPSLFGSQSASDSHLTCNQVEMPAENHHHEEIDRNNSGCSIANMPQGRQT 419
           KNVT+ QG        SQSAS S+LT NQVE+PAE      +  NNSGCS+ NMPQG Q 
Sbjct: 103 KNVTNTQG--------SQSASASYLTSNQVEIPAEG-----VGTNNSGCSVDNMPQGSQA 149

Query: 420 WSYNIDEIDPSIIDELPPEIQEEFRTWRRPLKRPNVVKRGSSITHYFLPDK 572
           WSYNIDEIDPSIIDELPPEIQ+EFRTW RP KRPNVVKRGSSIT YF PD+
Sbjct: 150 WSYNIDEIDPSIIDELPPEIQDEFRTWLRPRKRPNVVKRGSSITQYFRPDR 200


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score =  215 bits (547), Expect = 5e-54
 Identities = 113/190 (59%), Positives = 127/190 (66%)
 Frame = +3

Query: 3    QVDGWTXXXXXXXXXXXXXRMAQSESRRDLPAKEPRLVSNTSSLKVFXXXXXXXXXPQGN 182
            + DG T             R+  +E  RDLPA + R VSN SSLK            QGN
Sbjct: 519  KADGLTEESSLVSPSGSEDRILHNEPHRDLPATDLRRVSNISSLKAVGKKKTAGKKLQGN 578

Query: 183  CSIIKFFDNYHSSQSSFEQKNVTSAQGVKMPSLFGSQSASDSHLTCNQVEMPAENHHHEE 362
            CSI+ FF+NYH+SQSS EQKNV      K+ S  GS SA +SH TC QVEMPAE H HEE
Sbjct: 579  CSIVHFFNNYHNSQSSLEQKNV------KISSSLGSHSADNSHSTCIQVEMPAE-HPHEE 631

Query: 363  IDRNNSGCSIANMPQGRQTWSYNIDEIDPSIIDELPPEIQEEFRTWRRPLKRPNVVKRGS 542
             D N S CS+ NMPQGRQ WSYNI+EIDPSII+ELPPEIQ+EF+ W RP KRPNV KRGS
Sbjct: 632  FDTNKSRCSVGNMPQGRQDWSYNINEIDPSIINELPPEIQQEFQIWLRPHKRPNVAKRGS 691

Query: 543  SITHYFLPDK 572
            SITHYF PDK
Sbjct: 692  SITHYFSPDK 701


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 44/84 (52%), Positives = 54/84 (64%)
 Frame = +3

Query: 321 NQVEMPAENHHHEEIDRNNSGCSIANMPQGRQTWSYNIDEIDPSIIDELPPEIQEEFRTW 500
           NQV++P E     E   N+  CS+    + R+TWSY IDEIDPS++DELPPEI+ E + W
Sbjct: 695 NQVQLPKETMA-AETGPNDRRCSLGGGAERRETWSYKIDEIDPSVMDELPPEIRAEVQAW 753

Query: 501 RRPLKRPNVVKRGSSITHYFLPDK 572
            RP K     KRGSSI HYF P K
Sbjct: 754 LRPQKPAKTGKRGSSIAHYFSPMK 777



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/138 (31%), Positives = 66/138 (47%)
 Frame = +3

Query: 75  ESRRDLPAKEPRLVSNTSSLKVFXXXXXXXXXPQGNCSIIKFFDNYHSSQSSFEQKNVTS 254
           E+++  P +E R+  +  +L             QG  SI++FF  ++ + S  EQ+ V  
Sbjct: 494 ETQKQFPGEETRINYDMPNLDQ-QEKKRKMWEDQGTPSILRFFKRHNPTSSLSEQEQVEP 552

Query: 255 AQGVKMPSLFGSQSASDSHLTCNQVEMPAENHHHEEIDRNNSGCSIANMPQGRQTWSYNI 434
            Q  K+ S  G  + S+S     Q+++P E    E         S A    G     Y I
Sbjct: 553 IQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAETESNARRDSSAAKRNDG-----YKI 607

Query: 435 DEIDPSIIDELPPEIQEE 488
           D+ID S++DELPPEIQEE
Sbjct: 608 DDIDCSVMDELPPEIQEE 625


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 44/84 (52%), Positives = 54/84 (64%)
 Frame = +3

Query: 321 NQVEMPAENHHHEEIDRNNSGCSIANMPQGRQTWSYNIDEIDPSIIDELPPEIQEEFRTW 500
           NQV++P E     E   N+  CS+    + R+TWSY IDEIDPS++DELPPEI+ E + W
Sbjct: 689 NQVQLPKETMA-AETGPNDRRCSLGGGAERRETWSYKIDEIDPSVMDELPPEIRAEVQAW 747

Query: 501 RRPLKRPNVVKRGSSITHYFLPDK 572
            RP K     KRGSSI HYF P K
Sbjct: 748 LRPQKPAKTGKRGSSIAHYFSPMK 771



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/138 (31%), Positives = 66/138 (47%)
 Frame = +3

Query: 75  ESRRDLPAKEPRLVSNTSSLKVFXXXXXXXXXPQGNCSIIKFFDNYHSSQSSFEQKNVTS 254
           E+++  P +E R+  +  +L             QG  SI++FF  ++ + S  EQ+ V  
Sbjct: 488 ETQKQFPGEETRINYDMPNLDQ-QEKKRKMWEDQGTPSILRFFKRHNPTSSLSEQEQVEP 546

Query: 255 AQGVKMPSLFGSQSASDSHLTCNQVEMPAENHHHEEIDRNNSGCSIANMPQGRQTWSYNI 434
            Q  K+ S  G  + S+S     Q+++P E    E         S A    G     Y I
Sbjct: 547 IQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAETESNARRDSSAAKRNDG-----YKI 601

Query: 435 DEIDPSIIDELPPEIQEE 488
           D+ID S++DELPPEIQEE
Sbjct: 602 DDIDCSVMDELPPEIQEE 619


>ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus communis]
           gi|223532448|gb|EEF34241.1| DNA polymerase eta, putative
           [Ricinus communis]
          Length = 560

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
 Frame = +3

Query: 171 PQGNCSIIKFFDNYHSSQSSFEQKNVTSAQGVKMPSLFGSQSASDSHLTC---------- 320
           P G  SI+K+F+   S     +Q   +        S  GS     S +            
Sbjct: 415 PSGTSSIMKYFNGQSSFHCPSKQTPDSFIHDAPPSSPSGSSFWVVSFMLVLILNEELNLG 474

Query: 321 ---NQVEMPAEN---HHHEEIDRNNSGCSIANMPQGRQTWSYNIDEIDPSIIDELPPEIQ 482
              N VE+  E+    H    DR+N           R++W+Y IDEIDPS+I+ELPPEIQ
Sbjct: 475 SEVNLVELGKESLLAEHRANYDRHN-----LTQNAERESWNYKIDEIDPSVINELPPEIQ 529

Query: 483 EEFRTWRRPLKRPNVVKRGSSITHYFLPDK 572
           +E R W +P KR  +VK+G++I HYF P K
Sbjct: 530 DEVRAWLQPHKRARIVKKGATIAHYFSPPK 559


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