BLASTX nr result

ID: Glycyrrhiza24_contig00030578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030578
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   122   4e-26
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   120   9e-26
emb|CBI27547.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   115   4e-24
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   111   7e-23

>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/87 (73%), Positives = 65/87 (74%)
 Frame = -1

Query: 312  GENWSVGXXXXXXXXXXXXXXXXXXXLDEATASIDTVTDNLIQKTIREETSGCTVITVAH 133
            GENWSVG                   LDEATASIDT TDNLIQKTIREETSGCTVITVAH
Sbjct: 1338 GENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSGCTVITVAH 1397

Query: 132  RIPTVIDNDLVLVLDEGTIAEYDQPAQ 52
            RIPTVIDND VLVLDEGTI EYD+PAQ
Sbjct: 1398 RIPTVIDNDRVLVLDEGTIVEYDEPAQ 1424


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/87 (72%), Positives = 65/87 (74%)
 Frame = -1

Query: 312  GENWSVGXXXXXXXXXXXXXXXXXXXLDEATASIDTVTDNLIQKTIREETSGCTVITVAH 133
            GENWSVG                   LDEATASIDT TDNLIQKTIREET+GCTVITVAH
Sbjct: 1340 GENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETNGCTVITVAH 1399

Query: 132  RIPTVIDNDLVLVLDEGTIAEYDQPAQ 52
            RIPTVIDND VLVLDEGTI EYD+PAQ
Sbjct: 1400 RIPTVIDNDRVLVLDEGTIVEYDEPAQ 1426


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/87 (68%), Positives = 62/87 (71%)
 Frame = -1

Query: 312  GENWSVGXXXXXXXXXXXXXXXXXXXLDEATASIDTVTDNLIQKTIREETSGCTVITVAH 133
            GENWSVG                   LDEATAS+DT TDNLIQKTIREETS CTVITVAH
Sbjct: 1251 GENWSVGQRQLVCLARVLLQRRKILVLDEATASVDTATDNLIQKTIREETSKCTVITVAH 1310

Query: 132  RIPTVIDNDLVLVLDEGTIAEYDQPAQ 52
            RIPTVIDNDLVLVLDEG + EYD P Q
Sbjct: 1311 RIPTVIDNDLVLVLDEGKVVEYDSPPQ 1337


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/87 (68%), Positives = 62/87 (71%)
 Frame = -1

Query: 312  GENWSVGXXXXXXXXXXXXXXXXXXXLDEATASIDTVTDNLIQKTIREETSGCTVITVAH 133
            GENWSVG                   LDEATAS+DT TDNLIQKTIREETS CTVITVAH
Sbjct: 1350 GENWSVGQRQLVCLARVLLQRRKILVLDEATASVDTATDNLIQKTIREETSKCTVITVAH 1409

Query: 132  RIPTVIDNDLVLVLDEGTIAEYDQPAQ 52
            RIPTVIDNDLVLVLDEG + EYD P Q
Sbjct: 1410 RIPTVIDNDLVLVLDEGKVVEYDSPPQ 1436


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            3-like [Cucumis sativus]
          Length = 1444

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = -1

Query: 312  GENWSVGXXXXXXXXXXXXXXXXXXXLDEATASIDTVTDNLIQKTIREETSGCTVITVAH 133
            GENWSVG                   LDEATASIDT T+N+IQ+TI+EET+GCTVITVAH
Sbjct: 1319 GENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATENIIQETIKEETNGCTVITVAH 1378

Query: 132  RIPTVIDNDLVLVLDEGTIAEYDQPAQ 52
            RIPT+IDNDLVLVLDEG + E+D P+Q
Sbjct: 1379 RIPTIIDNDLVLVLDEGKVIEFDSPSQ 1405


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