BLASTX nr result

ID: Glycyrrhiza24_contig00030562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030562
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associate...   184   8e-45
ref|XP_003521977.1| PREDICTED: LOW QUALITY PROTEIN: spindle and ...   163   2e-38
gb|AFK38596.1| unknown [Lotus japonicus]                              144   1e-32
ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associate...   137   1e-30
ref|NP_191625.1| spindle and kinetochore-associated protein 1-li...   134   6e-30

>ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Glycine max]
          Length = 270

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/135 (71%), Positives = 110/135 (81%)
 Frame = +3

Query: 33  MDAKNAGSSLDSLMSSFNARILQLQELVIARNMYPXXXXXXXXXXXXXXXXMELQVQSIK 212
           M+   AG+SLDSLMSSFNARI QLQELVIARNMYP                MELQV++IK
Sbjct: 1   MNKNKAGASLDSLMSSFNARITQLQELVIARNMYPASGVEDLSAVDAAVSAMELQVKAIK 60

Query: 213 DRLREETEAIPKTKKLINASLRQQKKLQNMSLHIPSRMTDKMTMSNLETSRRLFPEFSGQ 392
           DRLREE  AIPKTKKLI+ASLRQQKKLQNMSLH+P +M DK+T+S+LETSR LFPEFSGQ
Sbjct: 61  DRLREEALAIPKTKKLIDASLRQQKKLQNMSLHVPYQMADKVTVSHLETSRCLFPEFSGQ 120

Query: 393 ESGSFEALKLDQEPA 437
           +SGSFEALKL++EPA
Sbjct: 121 DSGSFEALKLEEEPA 135


>ref|XP_003521977.1| PREDICTED: LOW QUALITY PROTEIN: spindle and kinetochore-associated
           protein 1 homolog [Glycine max]
          Length = 278

 Score =  163 bits (412), Expect = 2e-38
 Identities = 91/156 (58%), Positives = 108/156 (69%), Gaps = 21/156 (13%)
 Frame = +3

Query: 33  MDAKNAGSSLDSLMSSFNARILQLQELVIARN---------------------MYPXXXX 149
           M+   A +SLDSLMSSFNARI QLQELVIARN                     +YP    
Sbjct: 1   MNKNKAXASLDSLMSSFNARITQLQELVIARNSWEFHHFNFYLSKRFFGYKFALYPASGV 60

Query: 150 XXXXXXXXXXXXMELQVQSIKDRLREETEAIPKTKKLINASLRQQKKLQNMSLHIPSRMT 329
                       MELQV++IKDRLREE +AI KTKKL++ASL+ QKKLQNMSLH+P +M 
Sbjct: 61  ADLTAVDAAVSAMELQVKAIKDRLREEAQAITKTKKLVDASLQXQKKLQNMSLHVPYQMA 120

Query: 330 DKMTMSNLETSRRLFPEFSGQESGSFEALKLDQEPA 437
           DK+T+S+LETSR LFPEFSGQ+SGSFEAL+LD+EPA
Sbjct: 121 DKVTLSHLETSRCLFPEFSGQDSGSFEALRLDEEPA 156


>gb|AFK38596.1| unknown [Lotus japonicus]
          Length = 121

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/84 (86%), Positives = 79/84 (94%)
 Frame = +3

Query: 186 MELQVQSIKDRLREETEAIPKTKKLINASLRQQKKLQNMSLHIPSRMTDKMTMSNLETSR 365
           MELQVQ+IKDRLREETEAIPKTKKLI+ASLRQQKKLQNMSLH+P +M DKM +SNLETSR
Sbjct: 1   MELQVQAIKDRLREETEAIPKTKKLIDASLRQQKKLQNMSLHVPYQMPDKMAISNLETSR 60

Query: 366 RLFPEFSGQESGSFEALKLDQEPA 437
            LFPEFSGQ SGSFEALKLD+EPA
Sbjct: 61  CLFPEFSGQVSGSFEALKLDEEPA 84


>ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Vitis vinifera] gi|296089173|emb|CBI38876.3| unnamed
           protein product [Vitis vinifera]
          Length = 269

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/135 (55%), Positives = 95/135 (70%)
 Frame = +3

Query: 33  MDAKNAGSSLDSLMSSFNARILQLQELVIARNMYPXXXXXXXXXXXXXXXXMELQVQSIK 212
           MD K AG+SLDS++SSFN RI +LQELVI RNMYP                MELQVQ+IK
Sbjct: 1   MDVKEAGTSLDSIISSFNTRITELQELVIGRNMYPASSITDLTAVDASLKAMELQVQAIK 60

Query: 213 DRLREETEAIPKTKKLINASLRQQKKLQNMSLHIPSRMTDKMTMSNLETSRRLFPEFSGQ 392
           DRLR+E EAIPK KKLI+ASLRQQKKLQ+M  ++PS   D++  SNLE+S+ L  E S +
Sbjct: 61  DRLRDEIEAIPKAKKLIDASLRQQKKLQSMYSYVPSNFPDRVAPSNLESSKSLMSETS-K 119

Query: 393 ESGSFEALKLDQEPA 437
           +  +F + K ++EPA
Sbjct: 120 QCTNFGSEKHEEEPA 134


>ref|NP_191625.1| spindle and kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
           gi|75181374|sp|Q9LZZ7.1|SKA1_ARATH RecName: Full=Spindle
           and kinetochore-associated protein 1 homolog
           gi|7329676|emb|CAB82670.1| putative protein [Arabidopsis
           thaliana] gi|26450283|dbj|BAC42258.1| unknown protein
           [Arabidopsis thaliana] gi|28827580|gb|AAO50634.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646573|gb|AEE80094.1| spindle and
           kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
          Length = 272

 Score =  134 bits (338), Expect = 6e-30
 Identities = 77/137 (56%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
 Frame = +3

Query: 33  MDAKNAGSSLDSLMSSFNARILQLQELVIARNMYPXXXXXXXXXXXXXXXXMELQVQSIK 212
           M+   AGSSLDSL++SFN RI +LQELVIARNMYP                MELQVQSIK
Sbjct: 1   MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60

Query: 213 DRLREETEAIPKTKKLINASLRQQKKLQNMSLHIPSRMTDKMTMSNLETSRRLFPEFSGQ 392
           DRLREETEAIPK KKLI ASL+QQ KLQ MS++ PS   DK TM N + +R L  E + Q
Sbjct: 61  DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHFPDKATMLNSDLNRCLLQENAKQ 120

Query: 393 --ESGSFEALKLDQEPA 437
             +  +  +LK D+E A
Sbjct: 121 YEQHSTLSSLKFDEEAA 137


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