BLASTX nr result

ID: Glycyrrhiza24_contig00030539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030539
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   130   1e-28
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   101   7e-20
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...    97   2e-18
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...    89   3e-16
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]    61   8e-08

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/101 (65%), Positives = 78/101 (77%)
 Frame = -3

Query: 304  LTELPQNLDSLVNTEIPKSSPKTNVQDFRDENMETTPAYNTMDECSHADFKLESKFIYSS 125
            L ++PQ  D LV TEIPKSSP+    DF D++ME    YN MDECSH+DFKLESKF+ SS
Sbjct: 857  LAKVPQGPDLLVTTEIPKSSPRAIAPDFCDDSMEIATVYNPMDECSHSDFKLESKFVDSS 916

Query: 124  PLMETDMVQNLWRKLHDCQTDLREHATSEEIGAIEVVKLAS 2
            P ME D VQN+WRKL   +TDL++HA SE+IGAIEVVKLAS
Sbjct: 917  PSMEIDTVQNVWRKL---RTDLKQHAKSEQIGAIEVVKLAS 954


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/101 (52%), Positives = 72/101 (71%)
 Frame = -3

Query: 304  LTELPQNLDSLVNTEIPKSSPKTNVQDFRDENMETTPAYNTMDECSHADFKLESKFIYSS 125
            LT+L QN D L++TEI   SPK  +QD  DE++ET    N MDECS  DFK +  F+ S+
Sbjct: 900  LTKLSQNPD-LLDTEISDHSPKGVLQDVLDEHIETI--VNVMDECSRVDFKAKPMFLQSN 956

Query: 124  PLMETDMVQNLWRKLHDCQTDLREHATSEEIGAIEVVKLAS 2
            PL ET+ +Q LW+ L + + DL++HATSE++GA +VVKLAS
Sbjct: 957  PLTETEKIQKLWKDLRERRMDLKQHATSEQLGAFQVVKLAS 997


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/101 (52%), Positives = 69/101 (68%)
 Frame = -3

Query: 304  LTELPQNLDSLVNTEIPKSSPKTNVQDFRDENMETTPAYNTMDECSHADFKLESKFIYSS 125
            LT+L QNLD L++TEI   S K   QD  DE+MET    N MDECS  DFKL+   + S+
Sbjct: 904  LTKLSQNLD-LLDTEISDHSCKGVQQDVLDEHMETI--VNVMDECSRVDFKLKPTCLQSN 960

Query: 124  PLMETDMVQNLWRKLHDCQTDLREHATSEEIGAIEVVKLAS 2
               ET+ +Q LW  L +C+ DLR+HATSE++GA +VV+LAS
Sbjct: 961  SFAETEKIQKLWGDLLECRMDLRQHATSEQLGAFQVVRLAS 1001


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/101 (48%), Positives = 64/101 (63%)
 Frame = -3

Query: 304  LTELPQNLDSLVNTEIPKSSPKTNVQDFRDENMETTPAYNTMDECSHADFKLESKFIYSS 125
            L++L +N D L++TEIP+                 T     MDECS  DFKL+S F+ SS
Sbjct: 980  LSKLSENSDMLMDTEIPE-----------------TTIIKVMDECSRVDFKLKSTFVESS 1022

Query: 124  PLMETDMVQNLWRKLHDCQTDLREHATSEEIGAIEVVKLAS 2
            P +ETDMVQNLW+KL   Q DL++H  SE++GA +VVKLAS
Sbjct: 1023 PSLETDMVQNLWKKLR--QMDLKQHTISEQLGASQVVKLAS 1061


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = -3

Query: 295  LPQNLDSLVNTEIPKSSPKTNVQDFRDENMET-TPAYNTMDECSHADFKLESKFIYSS-P 122
            L QNL++++N +    S    V D ++E++E+ T  Y  MDECS   F + SK +     
Sbjct: 856  LSQNLETMINGD----SVNEEVGDSQNEHVESVTREYPVMDECSRMAFTIGSKSLEDPRS 911

Query: 121  LMETDMVQNLWRKLHDCQTDLREHATSEEIGAIEVVKL 8
             M T+ VQ  WRKL  C TDLR +A  E+  A ++V+L
Sbjct: 912  WMVTNSVQETWRKLRGCHTDLRRYAILEQRDASQIVEL 949


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