BLASTX nr result

ID: Glycyrrhiza24_contig00030522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030522
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       92   6e-17
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    82   3e-14
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...    77   1e-12
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]        74   2e-11
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    73   2e-11

>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -1

Query: 297  PLRKSERLRHRPHHLSDYIC-SLSTAXXXXXXXXXXXXXXXXXSFSKLSPDHSHFSLSIC 121
            P R S R++H P H  DYIC S S++                 S++KLS DH HF+LS+ 
Sbjct: 792  PQRISSRIKHSPPHFKDYICQSSSSSSSNNNTHVVSYPISHYLSYNKLSNDHLHFALSLT 851

Query: 120  QYTEPKSFDEASKYACWQQAMKVELDALAQNRTWTIVDLP 1
             +TEPKS+ EASK+ CW +AM+ EL AL Q  TW +VDLP
Sbjct: 852  THTEPKSYTEASKFDCWNKAMETELAALEQIGTWKLVDLP 891


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
 Frame = -1

Query: 381  PIEVHANQTNLD-QNCLVEVPDTAPA*VEPL------RKSERLRHRPHHLSDYICSL-ST 226
            P+ V+ + T LD  + L+++P + P   EP       RKS RL   P +L +Y C+L S+
Sbjct: 1077 PVSVNPDITTLDTSDILLDLPLSLPPPNEPTSPPAPTRKSHRLTKPPAYLFEYHCNLLSS 1136

Query: 225  AXXXXXXXXXXXXXXXXXSFSKLSPDHSHFSLSICQYTEPKSFDEASKYACWQQAMKVEL 46
                              S+ K SP H  F LS    TEPK++ +A K+ CW  AMK EL
Sbjct: 1137 ILSASNPGKSPYPLSSVLSYDKCSPCHKRFCLSFSSLTEPKTYKQACKFDCWNLAMKSEL 1196

Query: 45   DALAQNRTWTIVDL 4
            DALA   TW++VDL
Sbjct: 1197 DALASTNTWSVVDL 1210


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
 Frame = -1

Query: 297  PLRKSERLRHR--PHHLSDYICSLSTAXXXXXXXXXXXXXXXXXSFSKL---SPDHSHFS 133
            PL  S+ +R R  P HLSDY+C  ++                  SF  L   SP H  FS
Sbjct: 836  PLLHSKPIRQRRAPLHLSDYVCHNTSPTSHESLTSGTKSKYPLSSFHSLTLLSPSHKAFS 895

Query: 132  LSICQYTEPKSFDEASKYACWQQAMKVELDALAQNRTWTIVDLP 1
            +SI   TEP+S++EASK+  W  AMK EL+ALA+N TW IV+LP
Sbjct: 896  MSITHCTEPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELP 939


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = -1

Query: 294 LRKSERLRHRPHHLSDYICSLSTAXXXXXXXXXXXXXXXXXSFSK-LSPDHSHFSLSICQ 118
           LR S R +  P +L DYIC+ ST                     K LS     F+LS+  
Sbjct: 37  LRVSSRTKKSPSYLQDYICNPSTNSVSSANKSCILYPLSNFISHKHLSNSQHTFALSLVS 96

Query: 117 YTEPKSFDEASKYACWQQAMKVELDALAQNRTWTIVDLP 1
           + EPKS+ EA K  CW+QAM++EL+AL Q  TWT+VD+P
Sbjct: 97  HIEPKSYAEAIKSDCWKQAMQLELNALDQTGTWTVVDIP 135


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = -1

Query: 354  NLD---QNCLVEVPDTAPA*VEP--------LRKSERLRHRPHHLSDYICSLSTAXXXXX 208
            NLD   +NC  +   + P+  EP        LR+S R ++ P +L DY   L+++     
Sbjct: 1183 NLDPQIENCSSQPTISVPSSNEPSNEQPLPHLRRSTRAKNTPTYLQDYHRDLASSTPNTS 1242

Query: 207  XXXXXXXXXXXXSFSKLSPDHSHFSLSICQYTEPKSFDEASKYACWQQAMKVELDALAQN 28
                         +S+LSP H +F +SI    EP S+ EAS++ CW +AMKVEL AL  N
Sbjct: 1243 AIVRYPLSSVLS-YSRLSPAHRNFVMSISLTAEPTSYTEASRHDCWIKAMKVELQALQSN 1301

Query: 27   RTWTIVDLP 1
             TW +  LP
Sbjct: 1302 NTWRLTPLP 1310


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