BLASTX nr result

ID: Glycyrrhiza24_contig00030517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030517
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA ...   150   1e-34
ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransfe...   129   2e-28
ref|XP_003546965.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   128   5e-28
emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]   120   1e-25
ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransfe...   120   1e-25

>ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula]
           gi|355486691|gb|AES67894.1| 23S rRNA
           (uracil-5-)-methyltransferase rumA [Medicago truncatula]
          Length = 560

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/81 (85%), Positives = 74/81 (91%)
 Frame = +2

Query: 5   AQLRAKEDQVRDLIVHVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPKE 184
           AQ+ AKE+QVRDL++HVGRFS KELELHGIMKPIVPCDIQF YRNKMEFSFGP KWLPKE
Sbjct: 161 AQVNAKEEQVRDLVIHVGRFSQKELELHGIMKPIVPCDIQFHYRNKMEFSFGPYKWLPKE 220

Query: 185 SLHERNVVDGSENYALGLHAP 247
           SLHERNV  GSENY+LGLH P
Sbjct: 221 SLHERNVDAGSENYSLGLHVP 241


>ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransferase CT0009-like
           [Glycine max]
          Length = 533

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/83 (73%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   EAQLRAKEDQVRDLIVHVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPK 181
           EAQLRAKE+QVRDL++HVG+FS + L+LH ++KPIVPC IQF YRNKMEFSFGP +WLPK
Sbjct: 132 EAQLRAKEEQVRDLLIHVGKFSLQHLQLHAVLKPIVPCRIQFHYRNKMEFSFGPQRWLPK 191

Query: 182 ESLHERNVVDG-SENYALGLHAP 247
           ESL +R V D  +ENYALGLHAP
Sbjct: 192 ESLQDRIVDDDTNENYALGLHAP 214


>ref|XP_003546965.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized RNA
           methyltransferase CT0009-like [Glycine max]
          Length = 535

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/85 (70%), Positives = 72/85 (84%), Gaps = 3/85 (3%)
 Frame = +2

Query: 2   EAQLRAKEDQVRDLIVHVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPK 181
           EAQLRAKE+QVRDL++HVGRFS ++L+LHG++KPIVP DIQF YRN+MEFSFGP +WLPK
Sbjct: 137 EAQLRAKEEQVRDLLIHVGRFSREQLQLHGVIKPIVPFDIQFHYRNEMEFSFGPRRWLPK 196

Query: 182 ESLHERNV---VDGSENYALGLHAP 247
           E L +R     V  +ENYALGLHAP
Sbjct: 197 ELLQDRRADDDVGNNENYALGLHAP 221


>emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]
          Length = 1255

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/82 (68%), Positives = 66/82 (80%)
 Frame = +2

Query: 2   EAQLRAKEDQVRDLIVHVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPK 181
           EAQ+RAKE QV++L++HVG+FS K+ E   IMKPIVPCDIQF YRNKMEFSF   KWLP+
Sbjct: 144 EAQVRAKEQQVQELVIHVGKFSDKDPEFSSIMKPIVPCDIQFHYRNKMEFSFATQKWLPR 203

Query: 182 ESLHERNVVDGSENYALGLHAP 247
           E LHE+   DG+  YALGLHAP
Sbjct: 204 ELLHEKE--DGASGYALGLHAP 223


>ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransferase CT0009 [Vitis
           vinifera] gi|297743126|emb|CBI35993.3| unnamed protein
           product [Vitis vinifera]
          Length = 570

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = +2

Query: 2   EAQLRAKEDQVRDLIVHVGRFSSKELELHGIMKPIVPCDIQFRYRNKMEFSFGPLKWLPK 181
           EAQ+RAKE QV++L++HVG+FS K+ E   IMKPIVPCD+QF YRNKMEFSF   KWLP+
Sbjct: 172 EAQVRAKEQQVQELVIHVGKFSDKDPEFSSIMKPIVPCDVQFHYRNKMEFSFATQKWLPR 231

Query: 182 ESLHERNVVDGSENYALGLHAP 247
           E LHE+   DG+  YALGLHAP
Sbjct: 232 ELLHEKE--DGASGYALGLHAP 251


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