BLASTX nr result
ID: Glycyrrhiza24_contig00030516
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030516 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797... 77 1e-12 ref|XP_003626181.1| PHD and RING finger domain-containing protei... 68 9e-10 ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap... 59 3e-07 ref|XP_004165905.1| PREDICTED: uncharacterized protein LOC101229... 57 2e-06 ref|XP_004135770.1| PREDICTED: uncharacterized protein LOC101205... 57 2e-06 >ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797448 [Glycine max] Length = 813 Score = 77.4 bits (189), Expect = 1e-12 Identities = 49/89 (55%), Positives = 53/89 (59%) Frame = -1 Query: 267 RRSSRASKKPTXXXXXXXXXXXXKVECDDEDNFIDNGPTIXXXXXXXXXXXXXRPLLSDS 88 RRSS ASKKP K +C ED+FIDNG TI R LLSDS Sbjct: 213 RRSSIASKKPLRNKRRKNGRLRKKEKC--EDDFIDNGTTIGTTTRRKQGQKRRRVLLSDS 270 Query: 87 DCVSSEPSDFEYTISEEEREQVREAKKLC 1 D SS SDFE+TISEEEREQVREAK+LC Sbjct: 271 DYASSGSSDFEFTISEEEREQVREAKRLC 299 >ref|XP_003626181.1| PHD and RING finger domain-containing protein [Medicago truncatula] gi|355501196|gb|AES82399.1| PHD and RING finger domain-containing protein [Medicago truncatula] Length = 904 Score = 67.8 bits (164), Expect = 9e-10 Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Frame = -1 Query: 267 RRSSRASKKPTXXXXXXXXXXXXKVECDDEDNFIDNGPTIXXXXXXXXXXXXXRPLLSD- 91 R S SKKP KV+CDD D+F+DN P I R +L D Sbjct: 271 RSGSGVSKKPKRKRRRKNGGSTRKVQCDDADDFLDNVPAIRTNSRKRSVLKRRRVILEDA 330 Query: 90 ---SDCVSSEPSDFEYTISEEEREQVREAKKLC 1 SDC S PSD+E+TISEEE+EQVREA +LC Sbjct: 331 NSGSDC-ESRPSDYEFTISEEEKEQVREAVQLC 362 >ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] gi|223548440|gb|EEF49931.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] Length = 791 Score = 59.3 bits (142), Expect = 3e-07 Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Frame = -1 Query: 267 RRSSRASKKPTXXXXXXXXXXXXKVECDDEDN----FIDNGPTIXXXXXXXXXXXXXRPL 100 RR SR SKKP K C+ +D FID+ + + Sbjct: 168 RRKSRVSKKPLANKGRNNRRLRKKERCEFDDEYEGEFIDDSAFVRARSSKNSSARSRYAV 227 Query: 99 LSDSDCVSSEPSDFEYTISEEEREQVREAKKL 4 SDSD +SS SD+EYTISEEEREQVRE KL Sbjct: 228 YSDSDFMSSGSSDYEYTISEEEREQVREGSKL 259 >ref|XP_004165905.1| PREDICTED: uncharacterized protein LOC101229320 [Cucumis sativus] Length = 845 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Frame = -1 Query: 267 RRSSRASKKPTXXXXXXXXXXXXKVECDDEDN-FIDNGPTIXXXXXXXXXXXXXRPLL-S 94 +R +A+KKP+ DD+D+ F DN PT+ R ++ S Sbjct: 200 KRKPKAAKKPSRNKRRKKSGPQTVRNSDDDDDDFSDNYPTMKITRRKRPVSKRKRYVVQS 259 Query: 93 DSDCVSSEPSDFEYTISEEEREQVREAKKLC 1 D D + S SD+EYTISEEEREQVREA++LC Sbjct: 260 DLDGLLSGSSDYEYTISEEEREQVREAERLC 290 >ref|XP_004135770.1| PREDICTED: uncharacterized protein LOC101205950 [Cucumis sativus] Length = 830 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Frame = -1 Query: 267 RRSSRASKKPTXXXXXXXXXXXXKVECDDEDN-FIDNGPTIXXXXXXXXXXXXXRPLL-S 94 +R +A+KKP+ DD+D+ F DN PT+ R ++ S Sbjct: 185 KRKPKAAKKPSRNKRRKKSGPQTVRNSDDDDDDFSDNYPTMKITRRKRPVSKRKRYVVQS 244 Query: 93 DSDCVSSEPSDFEYTISEEEREQVREAKKLC 1 D D + S SD+EYTISEEEREQVREA++LC Sbjct: 245 DLDGLLSGSSDYEYTISEEEREQVREAERLC 275