BLASTX nr result

ID: Glycyrrhiza24_contig00030507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030507
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago ...   157   1e-36
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat...   155   3e-36
emb|CBI27699.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat...   127   1e-27
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   127   1e-27

>ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
           gi|355491760|gb|AES72963.1| hypothetical protein
           MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/92 (81%), Positives = 81/92 (88%)
 Frame = +3

Query: 6   CDPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGR 185
           CDPVIWNIVLSG S SGK DADVM+VFR MHS GE MP+SVT+A VLPVCARSGNLN G+
Sbjct: 101 CDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGK 160

Query: 186 SVHAYVIKSGFEVDTLDGNALVSMYAKCGLVS 281
           SVH YVIKSGFE+DT  GNALVSMYAKCGLV+
Sbjct: 161 SVHGYVIKSGFEMDTFAGNALVSMYAKCGLVA 192



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           D V WN +++G + +G++    + VF  + S    + +SVT+  +LP CA+  NL AG+ 
Sbjct: 311 DLVSWNTIIAGYALNGEW-LKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQ 369

Query: 189 VHAYVIKSGFEV-DTLDGNALVSMYAKCGLV 278
           VHAY+++  F   DT  GNALVS YAKCG +
Sbjct: 370 VHAYILRHPFLFEDTSAGNALVSFYAKCGYI 400


>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/93 (80%), Positives = 81/93 (87%)
 Frame = +3

Query: 3   HCDPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAG 182
           HCDPV+WNIVLSG SGS K DADVMRVFR MHS  EA+PNSVTVA VLPVCAR G+L+AG
Sbjct: 106 HCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAG 165

Query: 183 RSVHAYVIKSGFEVDTLDGNALVSMYAKCGLVS 281
           + VH YVIKSGF+ DTL GNALVSMYAKCGLVS
Sbjct: 166 KCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVS 198



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           D V WN  ++G + +G++    + +F  + S    +P+SVT+  +LP CA+  NL  G+ 
Sbjct: 317 DLVTWNAFIAGYTSNGEW-LKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQ 375

Query: 189 VHAYVIKSGF-EVDTLDGNALVSMYAKCG 272
           +HAY+ +  F   DT  GNALVS YAKCG
Sbjct: 376 IHAYIFRHPFLFYDTAVGNALVSFYAKCG 404


>emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           DPVIWNIVLSGL+G   ++A+VMR+FR MH   EA PNSVT+AIVLPVCAR    +AG+S
Sbjct: 43  DPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKS 101

Query: 189 VHAYVIKSGFEVDTLDGNALVSMYAKCGLV 278
           VH+YVIKSG E  TL GNAL+SMYAKCGLV
Sbjct: 102 VHSYVIKSGLESHTLAGNALISMYAKCGLV 131



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           D V WN +++G + +G++    + +F    S     P+SVT+  VLP CA   NL   + 
Sbjct: 251 DLVSWNAIIAGYASNGEW-LKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKG 309

Query: 189 VHAYVIK-SGFEVDTLDGNALVSMYAKC 269
           +H Y+I+  G   DT  GNAL+S YAKC
Sbjct: 310 IHGYIIRHPGLREDTSVGNALLSFYAKC 337


>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           DPVIWNIVLSGL+G   ++A+VMR+FR MH   EA PNSVT+AIVLPVCAR    +AG+S
Sbjct: 104 DPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKS 162

Query: 189 VHAYVIKSGFEVDTLDGNALVSMYAKCGLV 278
           VH+YVIKSG E  TL GNAL+SMYAKCGLV
Sbjct: 163 VHSYVIKSGLESHTLAGNALISMYAKCGLV 192



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9   DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
           D V WN +++G + +G++    + +F    S     P+SVT+  VLP CA   NL   + 
Sbjct: 312 DLVSWNAIIAGYASNGEW-LKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKG 370

Query: 189 VHAYVIK-SGFEVDTLDGNALVSMYAKC 269
           +H Y+I+  G   DT  GNAL+S YAKC
Sbjct: 371 IHGYIIRHPGLREDTSVGNALLSFYAKC 398


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = +3

Query: 9    DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
            DPVIWNIVLSGL+G   ++A+VMR+FR MH   EA PNSVT+AIVLPVCAR    +AG+S
Sbjct: 1036 DPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKS 1094

Query: 189  VHAYVIKSGFEVDTLDGNALVSMYAKCGLV 278
            VH+YVIKSG E  TL GNAL+SMYAKCGLV
Sbjct: 1095 VHSYVIKSGLESHTLAGNALISMYAKCGLV 1124



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9    DPVIWNIVLSGLSGSGKYDADVMRVFRTMHSGGEAMPNSVTVAIVLPVCARSGNLNAGRS 188
            D V WN +++G + +G++    + +F    S     P+SVT+  VLP CA   NL   + 
Sbjct: 1244 DLVSWNAIIAGYASNGEW-LKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKG 1302

Query: 189  VHAYVIK-SGFEVDTLDGNALVSMYAKC 269
            +H Y+I+  G   DT  GNAL+S YAKC
Sbjct: 1303 IHGYIIRHPGLREDTSVGNALLSFYAKC 1330


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