BLASTX nr result

ID: Glycyrrhiza24_contig00030489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030489
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   194   8e-48
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   188   4e-46
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   153   2e-35
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm...   143   1e-32

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  194 bits (492), Expect = 8e-48
 Identities = 104/136 (76%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
 Frame = -1

Query: 406 MADTTNSVDASLWWDXXXXXXXXXXXXXXXSDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 227
           MADT+ SVDASLWWD               SDLP NLAKKLKDNHAWFVDTL+ FKPPNQ
Sbjct: 1   MADTS-SVDASLWWDSFTVLFSELENSSLTSDLPPNLAKKLKDNHAWFVDTLTRFKPPNQ 59

Query: 226 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAA-ADS 50
            SKEAL+SK LKIG   LTIQP LKD ALQISSCL LDEVQSYILVERSIKHNNAA ADS
Sbjct: 60  SSKEALSSKTLKIGSHQLTIQPQLKDTALQISSCLLLDEVQSYILVERSIKHNNAAVADS 119

Query: 49  MAPEFLHMMLIQYYKE 2
           MAPEFL+MML+QYYKE
Sbjct: 120 MAPEFLYMMLVQYYKE 135


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
           gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
           protein [Medicago truncatula]
          Length = 1967

 Score =  188 bits (477), Expect = 4e-46
 Identities = 96/135 (71%), Positives = 106/135 (78%)
 Frame = -1

Query: 406 MADTTNSVDASLWWDXXXXXXXXXXXXXXXSDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 227
           MADTT SVDASLWWD               SDLP NLAKKLKDNHAWFVDTLSCFKPPNQ
Sbjct: 1   MADTT-SVDASLWWDSFTLLFTELEDSSLSSDLPLNLAKKLKDNHAWFVDTLSCFKPPNQ 59

Query: 226 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADSM 47
           KSK+ALNSK +KIG   + I+P LKDKALQISSCL LDEVQSYILVER I+ NNAA DS 
Sbjct: 60  KSKDALNSKNVKIGSHQMNIEPQLKDKALQISSCLLLDEVQSYILVERYIEDNNAAIDSK 119

Query: 46  APEFLHMMLIQYYKE 2
           AP+F+ ++LI+YYKE
Sbjct: 120 APDFIQIILIEYYKE 134


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/135 (55%), Positives = 95/135 (70%)
 Frame = -1

Query: 406 MADTTNSVDASLWWDXXXXXXXXXXXXXXXSDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 227
           +A   +SVD  LWWD               SDLP  L KK+KDNHAWFVD  S FKPPN+
Sbjct: 12  LAPNPSSVDGLLWWDSFSLLLTELESVSPSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNK 71

Query: 226 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADSM 47
           KS+EAL+SK++KIG + LT+QP LK+ AL++S+ L LDEVQSY+LVER ++HNN A + M
Sbjct: 72  KSREALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVNLM 131

Query: 46  APEFLHMMLIQYYKE 2
             EFLH++L QYY E
Sbjct: 132 VQEFLHVILFQYYIE 146


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/135 (55%), Positives = 95/135 (70%)
 Frame = -1

Query: 406 MADTTNSVDASLWWDXXXXXXXXXXXXXXXSDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 227
           +A   +SVD  LWWD               SDLP  L KK+KDNHAWFVD  S FKPPN+
Sbjct: 12  LAPNPSSVDGLLWWDSFSLLLTELESVSPSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNK 71

Query: 226 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADSM 47
           KS+EAL+SK++KIG + LT+QP LK+ AL++S+ L LDEVQSY+LVER ++HNN A + M
Sbjct: 72  KSREALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVNLM 131

Query: 46  APEFLHMMLIQYYKE 2
             EFLH++L QYY E
Sbjct: 132 VQEFLHVILFQYYIE 146


>ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis]
           gi|223532295|gb|EEF34096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1783

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/129 (55%), Positives = 91/129 (70%)
 Frame = -1

Query: 388 SVDASLWWDXXXXXXXXXXXXXXXSDLPRNLAKKLKDNHAWFVDTLSCFKPPNQKSKEAL 209
           SVD SLWWD               S LP ++ KKLK NHAWFVDT+S FKPPN +S++AL
Sbjct: 6   SVDPSLWWDPFTSILTDLENAPLSSQLPPSIEKKLKRNHAWFVDTVSRFKPPNAESRQAL 65

Query: 208 NSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADSMAPEFLH 29
            SK++K+G   L I+P LKDKAL ISS L LDEVQSYILVERS++ +  A DS+  E+LH
Sbjct: 66  ISKQVKVGSHELIIKPELKDKALHISSYLSLDEVQSYILVERSLESHGLAVDSIVEEYLH 125

Query: 28  MMLIQYYKE 2
           ++L++YY E
Sbjct: 126 VVLLEYYIE 134


Top