BLASTX nr result

ID: Glycyrrhiza24_contig00030479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030479
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine ...   129   2e-28
ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2...   127   1e-27
ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1...   127   1e-27
ref|XP_003537256.1| PREDICTED: DNA helicase INO80-like [Glycine ...   111   5e-23
ref|XP_003625104.1| Chromatin remodeling complex subunit [Medica...   110   1e-22

>ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1543

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/92 (72%), Positives = 76/92 (82%)
 Frame = -2

Query: 278 YYGNSSQDEESRDSQGGGAIANHSNGNVHGREVTLLKKRGRSQNSDDEDRGSFYGTYMTE 99
           YYGNSSQDE SRDSQG G IANHSNGNVH +EV L KKR  S NSD+E++ SFYGT+MTE
Sbjct: 36  YYGNSSQDE-SRDSQGVG-IANHSNGNVHEKEVNLFKKRRWSLNSDNEEKSSFYGTHMTE 93

Query: 98  ERYRSMLGDHAQKYKRRSKEASSSPAQNRVAL 3
           ERYRSMLG+H QKYKRR K   +SPAQN+ A+
Sbjct: 94  ERYRSMLGEHIQKYKRRFKGTLNSPAQNQAAV 125


>ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max]
          Length = 1542

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -2

Query: 278 YYGNSSQDEESRDSQGGGAIANHSNGNVHGREVTLLKKRGRSQNSDDEDRGSFYGTYMTE 99
           YYGNSSQDE SRDS+GGG I NH NGNVH +EV L KKR  S NSD+E++ SFYG +MTE
Sbjct: 36  YYGNSSQDE-SRDSEGGG-ITNHGNGNVHEKEVNLFKKRRWSLNSDNEEKTSFYGAHMTE 93

Query: 98  ERYRSMLGDHAQKYKRRSKEASSSPAQNRVA 6
           ERYRSMLG+H QKYKRR K   SSPAQN+ A
Sbjct: 94  ERYRSMLGEHIQKYKRRFKGTLSSPAQNQAA 124


>ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1 [Glycine max]
          Length = 1531

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -2

Query: 278 YYGNSSQDEESRDSQGGGAIANHSNGNVHGREVTLLKKRGRSQNSDDEDRGSFYGTYMTE 99
           YYGNSSQDE SRDS+GGG I NH NGNVH +EV L KKR  S NSD+E++ SFYG +MTE
Sbjct: 36  YYGNSSQDE-SRDSEGGG-ITNHGNGNVHEKEVNLFKKRRWSLNSDNEEKTSFYGAHMTE 93

Query: 98  ERYRSMLGDHAQKYKRRSKEASSSPAQNRVA 6
           ERYRSMLG+H QKYKRR K   SSPAQN+ A
Sbjct: 94  ERYRSMLGEHIQKYKRRFKGTLSSPAQNQAA 124


>ref|XP_003537256.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1460

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = -2

Query: 278 YYGNSSQDEESRDSQGGGAIANHSNGNVHGREVTLLKKRGRSQNSD--DEDRGSFYGTYM 105
           YYGN+SQ++ESRDSQ G    N+ NGNVH RE     KR  S+NSD  DE++G +YGT+M
Sbjct: 37  YYGNNSQEDESRDSQAGER-ENYCNGNVHAREQNSSSKRVWSENSDTDDENKGRYYGTHM 95

Query: 104 TEERYRSMLGDHAQKYKRRSKEASSSPAQNRVAL 3
           T+ERY+SMLGDH QKYKRR K+A S+  QN+V +
Sbjct: 96  TQERYQSMLGDHVQKYKRRRKDAMSNTDQNQVVV 129


>ref|XP_003625104.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355500119|gb|AES81322.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1529

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -2

Query: 278 YYGNSSQDEESRDSQGGGAIANHSNGNVHGREVTLLKKRGRSQNSDDEDRGSFYGTYMTE 99
           YYGNSSQDE SR ++G  AI +HSNGNV GR+V LLKKR  S+NSD+E++  FY T + E
Sbjct: 26  YYGNSSQDE-SRITRGV-AIGSHSNGNVSGRDVNLLKKRSWSRNSDNEEKSGFYETPVME 83

Query: 98  ERYRSMLGDHAQKYKRRSKEASSSPAQNRV 9
           ERYRSMLGDH +KYKRR K  SSSP  N+V
Sbjct: 84  ERYRSMLGDHIKKYKRRFKGNSSSPGPNQV 113


Top