BLASTX nr result

ID: Glycyrrhiza24_contig00030477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030477
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537342.1| PREDICTED: uncharacterized protein LOC100813...    80   2e-13
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    78   9e-13
gb|ABN05702.1| reverse transcriptase - beet retrotransposon, put...    75   7e-12
ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago ...    74   2e-11
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    73   3e-11

>ref|XP_003537342.1| PREDICTED: uncharacterized protein LOC100813584 [Glycine max]
          Length = 977

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/80 (43%), Positives = 49/80 (61%)
 Frame = -3

Query: 254 EFNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDIS 75
           EFN++IS+M + ++  +G++FTW   +GSAM              +W  + Q+V DRD S
Sbjct: 86  EFNSWISDMALEEVRFVGRRFTWCRPNGSAMSRLDRFLLSDEWLVQWPGSTQFVLDRDYS 145

Query: 74  DHCPIWILCSTQDWGPKPFK 15
           DHCPI +   T DWGPKPFK
Sbjct: 146 DHCPILLKSKTIDWGPKPFK 165


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 32/84 (38%), Positives = 51/84 (60%)
 Frame = -3

Query: 254  EFNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDIS 75
            EFN++I+++ + + P +G+KFTWF  +G+A              S+W A+ Q++ DR+ S
Sbjct: 1538 EFNDWIADLEVEEPPCVGRKFTWFRPNGAARSKLDRTFVSAEWFSKWPASTQFILDRNFS 1597

Query: 74   DHCPIWILCSTQDWGPKPFKFNNC 3
            DHCP+       DWGPKPF+  +C
Sbjct: 1598 DHCPVLFTSKYVDWGPKPFRVLDC 1621


>gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 384

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = -3

Query: 251 FNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDISD 72
           +  F  ++ + D  V+G+KFTW++++G +M               W  +A WV  RD+SD
Sbjct: 132 YKAFARDVELEDKNVLGRKFTWYHSNGRSMSRIDHVLVSDEWKRAWGDSALWVLPRDVSD 191

Query: 71  HCPIWILCSTQDWGPKPFKFNN 6
           HCP+ +     DWGPKPF+FNN
Sbjct: 192 HCPLVLKVGGWDWGPKPFRFNN 213


>ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago truncatula]
           gi|355500907|gb|AES82110.1| hypothetical protein
           MTR_7g108440 [Medicago truncatula]
          Length = 848

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = -3

Query: 251 FNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDISD 72
           FN F+++M + D+ V+G++FTWF+ +G +M             + W     WV  RD+ D
Sbjct: 735 FNRFVTDMEVEDLNVVGRQFTWFHPNGVSMSRIDRVLISEEWMNVWGEATLWVLPRDVFD 794

Query: 71  HCPIWILCSTQDWGPKPFKFNN 6
           HC + +     DWGPKPF+FNN
Sbjct: 795 HCLLVLRGDGWDWGPKPFRFNN 816


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = -3

Query: 254  EFNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDIS 75
            EFN++ISE+++ DI  +G  FTWF  +GSA              S W   +Q V  RD S
Sbjct: 810  EFNDWISELDLHDIRCLGSNFTWFRPNGSAKSRLDRFLVSDQWLSLWPDTSQHVLHRDYS 869

Query: 74   DHCPIWILCSTQDWGPKPFKFNNC 3
            DHCPI +     +WGPKPF+  +C
Sbjct: 870  DHCPIILKTKMVNWGPKPFRVMDC 893



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/80 (43%), Positives = 44/80 (55%)
 Frame = -3

Query: 254  EFNNFISEMNIVDIPVMGKKFTWFNADGSAMXXXXXXXXXXXXXSEWQANAQWVGDRDIS 75
            +FN++ISEM + DI  +G  FTWF  +GSA              S W   +Q V  RD S
Sbjct: 2427 DFNDWISEMELHDIRCLGSNFTWFRPNGSAKSRLDRFLVSDQWLSLWPDTSQHVLQRDYS 2486

Query: 74   DHCPIWILCSTQDWGPKPFK 15
            DHCPI +     DWGPKPF+
Sbjct: 2487 DHCPIILKTRLVDWGPKPFR 2506


Top