BLASTX nr result
ID: Glycyrrhiza24_contig00030464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030464 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain... 80 1e-13 emb|CBI34941.3| unnamed protein product [Vitis vinifera] 80 1e-13 ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu... 73 3e-11 >ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis vinifera] Length = 2164 Score = 80.5 bits (197), Expect = 1e-13 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Frame = +1 Query: 1 IPSFVPFISPFVSDYTLLSAQKDD-SIVGDETKASESRVSQGNTDGAGTCHDHKSGISTE 177 +PSFV P++SD TLL + GD A +R+ G G+G+ D+ S S Sbjct: 1910 VPSFVSSRPPYISDATLLLVPSGELKATGDMMLAQGNRIPAG---GSGSFSDNSSRDS-- 1964 Query: 178 RLAANESNKAGESNKSSLGEQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVSHIL 354 AANE++ A ++KS+L EQKD K+SL + +M V CCV+P SSLRPLVGKV IL Sbjct: 1965 --AANETSAASRTDKSAL-EQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQIL 2020 >emb|CBI34941.3| unnamed protein product [Vitis vinifera] Length = 1907 Score = 80.5 bits (197), Expect = 1e-13 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Frame = +1 Query: 1 IPSFVPFISPFVSDYTLLSAQKDD-SIVGDETKASESRVSQGNTDGAGTCHDHKSGISTE 177 +PSFV P++SD TLL + GD A +R+ G G+G+ D+ S S Sbjct: 1583 VPSFVSSRPPYISDATLLLVPSGELKATGDMMLAQGNRIPAG---GSGSFSDNSSRDS-- 1637 Query: 178 RLAANESNKAGESNKSSLGEQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVSHIL 354 AANE++ A ++KS+L EQKD K+SL + +M V CCV+P SSLRPLVGKV IL Sbjct: 1638 --AANETSAASRTDKSAL-EQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQIL 1693 >ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis] gi|223543360|gb|EEF44891.1| DNA binding protein, putative [Ricinus communis] Length = 2145 Score = 72.8 bits (177), Expect = 3e-11 Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 5/123 (4%) Frame = +1 Query: 1 IPSFVPFISPFVSDY--TLLSAQKDDSIVGDETKASESRV-SQGNTDGAGTCHDHKSGIS 171 IP FV ISP++SD L+S + + I GDE E +V QGN + S S Sbjct: 1880 IPPFVTSISPYLSDSISVLISPENNTRIPGDECNVDERQVFPQGNWNENRAVLQSSSDNS 1939 Query: 172 TERLAANESNKAGESNKSSLG--EQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVS 345 T + + NE + ++NK LG +++ K SL +MG CCVVP SSL PLVGKVS Sbjct: 1940 TRKTSINEIGEVLKTNKPPLGCLQRRGKKSSLGKCFPEMGPGCCCVVPESSLMPLVGKVS 1999 Query: 346 HIL 354 IL Sbjct: 2000 SIL 2002