BLASTX nr result

ID: Glycyrrhiza24_contig00030464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030464
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    80   1e-13
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    73   3e-11

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    IPSFVPFISPFVSDYTLLSAQKDD-SIVGDETKASESRVSQGNTDGAGTCHDHKSGISTE 177
            +PSFV    P++SD TLL     +    GD   A  +R+  G   G+G+  D+ S  S  
Sbjct: 1910 VPSFVSSRPPYISDATLLLVPSGELKATGDMMLAQGNRIPAG---GSGSFSDNSSRDS-- 1964

Query: 178  RLAANESNKAGESNKSSLGEQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVSHIL 354
              AANE++ A  ++KS+L EQKD K+SL +   +M V  CCV+P SSLRPLVGKV  IL
Sbjct: 1965 --AANETSAASRTDKSAL-EQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQIL 2020


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    IPSFVPFISPFVSDYTLLSAQKDD-SIVGDETKASESRVSQGNTDGAGTCHDHKSGISTE 177
            +PSFV    P++SD TLL     +    GD   A  +R+  G   G+G+  D+ S  S  
Sbjct: 1583 VPSFVSSRPPYISDATLLLVPSGELKATGDMMLAQGNRIPAG---GSGSFSDNSSRDS-- 1637

Query: 178  RLAANESNKAGESNKSSLGEQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVSHIL 354
              AANE++ A  ++KS+L EQKD K+SL +   +M V  CCV+P SSLRPLVGKV  IL
Sbjct: 1638 --AANETSAASRTDKSAL-EQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQIL 1693


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
 Frame = +1

Query: 1    IPSFVPFISPFVSDY--TLLSAQKDDSIVGDETKASESRV-SQGNTDGAGTCHDHKSGIS 171
            IP FV  ISP++SD    L+S + +  I GDE    E +V  QGN +         S  S
Sbjct: 1880 IPPFVTSISPYLSDSISVLISPENNTRIPGDECNVDERQVFPQGNWNENRAVLQSSSDNS 1939

Query: 172  TERLAANESNKAGESNKSSLG--EQKDGKFSLFSPASDMGVDGCCVVPLSSLRPLVGKVS 345
            T + + NE  +  ++NK  LG  +++  K SL     +MG   CCVVP SSL PLVGKVS
Sbjct: 1940 TRKTSINEIGEVLKTNKPPLGCLQRRGKKSSLGKCFPEMGPGCCCVVPESSLMPLVGKVS 1999

Query: 346  HIL 354
             IL
Sbjct: 2000 SIL 2002


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