BLASTX nr result

ID: Glycyrrhiza24_contig00030457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030457
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   182   2e-44
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   178   4e-43
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   175   3e-42
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   167   6e-40
ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding...   167   6e-40

>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/93 (93%), Positives = 90/93 (96%)
 Frame = -1

Query: 280 PVLASHLFDSVFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 101
           PVL SHLFDS FDWNE+EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR
Sbjct: 438 PVLMSHLFDSEFDWNEIEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 497

Query: 100 YRKTISREEIEVYDVSKEMDLEIIKQNSQVERI 2
           YR+ ISREEIEVYDVSKEMDLEII+QNSQVERI
Sbjct: 498 YRRAISREEIEVYDVSKEMDLEIIRQNSQVERI 530


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -1

Query: 280 PVLASHLFDSVFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 101
           PVL SHLFDS  DWNE+EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR
Sbjct: 456 PVLMSHLFDSEIDWNEIEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 515

Query: 100 YRKTISREEIEVYDVSKEMDLEIIKQNSQVERI 2
           YR+TISREEIEV DVSKEMDL+IIKQNSQVERI
Sbjct: 516 YRRTISREEIEVNDVSKEMDLDIIKQNSQVERI 548


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/93 (90%), Positives = 88/93 (94%)
 Frame = -1

Query: 280 PVLASHLFDSVFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 101
           PVL SHLFDS  DWNE+EFLIKWKGQSHLHC WKSFAELQNLSGFKKVLNYTKKIMEDIR
Sbjct: 453 PVLLSHLFDSEIDWNEIEFLIKWKGQSHLHCLWKSFAELQNLSGFKKVLNYTKKIMEDIR 512

Query: 100 YRKTISREEIEVYDVSKEMDLEIIKQNSQVERI 2
           YR+TISREEIEV DVSKEMDL+IIKQNSQVER+
Sbjct: 513 YRRTISREEIEVNDVSKEMDLDIIKQNSQVERV 545


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  167 bits (424), Expect = 6e-40
 Identities = 77/93 (82%), Positives = 88/93 (94%)
 Frame = -1

Query: 280 PVLASHLFDSVFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 101
           PVL+SH FDS  DWNE+EFLIKWKGQSHLHCQWK F+ELQ LSGFKKVLNYTKK+M++IR
Sbjct: 450 PVLSSHSFDSEPDWNEVEFLIKWKGQSHLHCQWKPFSELQYLSGFKKVLNYTKKVMDEIR 509

Query: 100 YRKTISREEIEVYDVSKEMDLEIIKQNSQVERI 2
           YRK++SREEIEVYDVSKEMDL++IKQNSQVER+
Sbjct: 510 YRKSVSREEIEVYDVSKEMDLDLIKQNSQVERV 542


>ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Cucumis sativus]
          Length = 1777

 Score =  167 bits (424), Expect = 6e-40
 Identities = 77/93 (82%), Positives = 88/93 (94%)
 Frame = -1

Query: 280 PVLASHLFDSVFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIR 101
           PVL+SH FDS  DWNE+EFLIKWKGQSHLHCQWK F+ELQ LSGFKKVLNYTKK+M++IR
Sbjct: 450 PVLSSHSFDSEPDWNEVEFLIKWKGQSHLHCQWKPFSELQYLSGFKKVLNYTKKVMDEIR 509

Query: 100 YRKTISREEIEVYDVSKEMDLEIIKQNSQVERI 2
           YRK++SREEIEVYDVSKEMDL++IKQNSQVER+
Sbjct: 510 YRKSVSREEIEVYDVSKEMDLDLIKQNSQVERV 542


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