BLASTX nr result

ID: Glycyrrhiza24_contig00030453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030453
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532278.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    85   5e-15
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    84   2e-14
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    82   6e-14

>ref|XP_002532278.1| conserved hypothetical protein [Ricinus communis]
           gi|223528012|gb|EEF30093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
 Frame = -3

Query: 290 DYIELPKTSHQLEQEVALGFGNVPATKEYKIVRVVNYNNNH-----RTLRLRGWSERSDV 126
           ++IELPK+    +QEV  GFG  P T+EYK+V++V Y N H     R  R R +  +S+V
Sbjct: 3   NHIELPKSLKYPDQEVVFGFGFHPKTQEYKVVKIVYYRNGHSGGYPRATR-RQFYPQSEV 61

Query: 125 QILTIGSTELAWRSLGAIHWKLDLRPSEAFINGALHWVT 9
           QILT+GS E  WRSLG + ++L  R SEA +NG LHWV+
Sbjct: 62  QILTVGSCE--WRSLGKMSYQLVRRQSEALVNGRLHWVS 98


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -3

Query: 290 DYIELPKTSHQLEQEVALGFGNVPATKEYKIVRVVNYNNNHRTLRL--RGWSERSDVQIL 117
           D+ +LPK+    +QEV  GFG  P T+ YK+V+VV Y N +       R    +S+VQ+L
Sbjct: 152 DFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVL 211

Query: 116 TIGSTELAWRSLGAIHWKLDLRPSEAFINGALHWVT 9
           T+GS    WRSLG + ++LD  PSEA +NG LHWVT
Sbjct: 212 TLGSP--TWRSLGKVSYQLDRWPSEALVNGRLHWVT 245


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
 Frame = -3

Query: 290 DYIELPKTSHQLEQE-VALGFGNVPATKEYKIVRVVNYNNNHR---TLRLRGWS-ERSDV 126
           DY+ELP+    L Q  VA GFG    TKEYK+VRVV Y NN       + R +S  RS+V
Sbjct: 147 DYLELPEPGQVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEV 206

Query: 125 QILTIGSTELAWRSLGAIHWKLDLRPSEAFINGALHWVTTR 3
           Q+LT+G+  L WRS G   ++L   PS   +NG LHW++ R
Sbjct: 207 QVLTVGNGSLTWRSKGETSYQLLGNPSHVVVNGRLHWLSCR 247


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
 Frame = -3

Query: 293 GDYIELPKTSHQLEQEVALGFGNVPATKEYKIVRVVNYNNNH----RTLRLRGWSERSDV 126
           G Y ELPK+    +QEV  GFG  P TKEYK++R+V Y N H    R+ R+      S+V
Sbjct: 151 GCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRI--IYPLSEV 208

Query: 125 QILTIGSTELAWRSLGAIHWKLDLRPSEAFINGALHWVT 9
           QILT+G  E  WRSLG + ++L  R S A +NG LHW++
Sbjct: 209 QILTLGCPE--WRSLGKVSYRLVRRASGALVNGRLHWIS 245


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = -3

Query: 293 GDYIELPKTSHQLEQEVALGFGNVPATKEYKIVRVVNYNNNH----RTLRLRGWSERSDV 126
           G Y ELPK+    +QEV  GFG  P T EYK++R+V Y N H    R+ R+      S V
Sbjct: 150 GRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRI--IYPLSQV 207

Query: 125 QILTIGSTELAWRSLGAIHWKLDLRPSEAFINGALHWVT 9
           QILT+G     WRSLG + ++L  R SE  +NG LHWV+
Sbjct: 208 QILTLGCP--GWRSLGKVSYRLVRRASETLVNGRLHWVS 244


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