BLASTX nr result

ID: Glycyrrhiza24_contig00030450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030450
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   194   5e-48
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   186   2e-45
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   186   2e-45
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   186   2e-45
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   182   2e-44

>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  194 bits (494), Expect = 5e-48
 Identities = 97/98 (98%), Positives = 97/98 (98%)
 Frame = +2

Query: 2   ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDE 181
           ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNK GSMLAAAGDDE
Sbjct: 67  ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSMLAAAGDDE 126

Query: 182 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 295
           GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL
Sbjct: 127 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 164


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDE 181
           ALALSPNSTCLASGSVDHSVKLYK+PGGEFE NITRFTLPIRSLAFNKSGSMLAAAGDDE
Sbjct: 67  ALALSPNSTCLASGSVDHSVKLYKYPGGEFERNITRFTLPIRSLAFNKSGSMLAAAGDDE 126

Query: 182 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 295
           GIKLINT DG+IARVLKGHKG +TGLAFDPNGEYLASL
Sbjct: 127 GIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASL 164


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDE 181
           ALALSPNSTCLASGSVDHSVKLYK+PGGEFE NITRFTLPIRSLAFNKSGSMLAAAGDDE
Sbjct: 67  ALALSPNSTCLASGSVDHSVKLYKYPGGEFERNITRFTLPIRSLAFNKSGSMLAAAGDDE 126

Query: 182 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 295
           GIKLINT DG+IARVLKGHKG +TGLAFDPNGEYLASL
Sbjct: 127 GIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASL 164


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/98 (92%), Positives = 96/98 (97%)
 Frame = +2

Query: 2   ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDE 181
           AL+LSPNSTCLASGS+DHSVKLYKFPGGEFE+NITRFTLPIR LAFNKSGSMLAAAGDDE
Sbjct: 68  ALSLSPNSTCLASGSIDHSVKLYKFPGGEFESNITRFTLPIRVLAFNKSGSMLAAAGDDE 127

Query: 182 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 295
           GIKLINT+DGSIARVLKGHK PVTGLAFDPNGEYLAS+
Sbjct: 128 GIKLINTIDGSIARVLKGHKEPVTGLAFDPNGEYLASV 165


>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/98 (88%), Positives = 96/98 (97%)
 Frame = +2

Query: 2   ALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDE 181
           ALALSPNSTCLASGS+DHSVKLYKFPGGEF+TN+TRFTLPIR ++FN+SGS+LAAAGDDE
Sbjct: 66  ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNVTRFTLPIRVISFNRSGSILAAAGDDE 125

Query: 182 GIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASL 295
           GIKLINT+DGSIARVLKGHKG VTGLAFDPNGEYLAS+
Sbjct: 126 GIKLINTIDGSIARVLKGHKGSVTGLAFDPNGEYLASV 163